Transcript Information: R_Transcript_50548.p1


Annotated TAIR IDAT1G19610.1
Annotated Gene NameArabidopsis defensin-like protein
Annotated Gene Symbol(s)LCR78, PDF1.4
Annotation TypeHomolog
Chromosome Positionchr1:6781674-6782024 | Reverse length=78
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1106.44548517158
Replicate 285.232506640418
Replicate 383.008573863285
Condition 2: 8 Hour
Replicate 175.881937905819
Replicate 276.824019791004
Replicate 355.173707529295
Condition 3: 24 Hour
Replicate 140.00568388194
Replicate 223.365472290018
Replicate 344.208829268585


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50548.p1 GENE.R_Transcript_50548~~R_Transcript_50548.p1 ORF type:complete len:101 (+),score=12.33 R_Transcript_50548:43-303(+)
ATGGCTGCTAAGGTTGGCGGTTCAGTGAGGTTGGTGACAATTTGCCTCATGTTGCTCATCGTTGCCAACATGGAAATGATGCAAGTGGAAGGACAACCAGGTTGGTGTTGGGACTACAGCAAGTACTTTAGAGGAAGGTGTAGAAGTAATTCCAAGTGCAACTCTACTTGCGTGTCAAGAGAAGGCAAACGTAGAGGCAAATGTATGCGAGACTCTCGTGGTGTTGCTTGCTTTTGTGAGATTAGATGCTTTCATGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50548.p1 GENE.R_Transcript_50548~~R_Transcript_50548.p1 ORF type:complete len:101 (+),score=12.33 R_Transcript_50548:43-303(+)
MAAKVGGSVRLVTICLMLLIVANMEMMQVEGQPGWCWDYSKYFRGRCRSNSKCNSTCVSREGKRRGKCMRDSRGVACFCEIRCFHV*

Click here to download the sequence:
Link to NCBI Protein BLAST