Transcript Information: R_Transcript_50549.p1


Annotated TAIR IDAT1G19610.1
Annotated Gene NameArabidopsis defensin-like protein
Annotated Gene Symbol(s)LCR78, PDF1.4
Annotation TypeHomolog
Chromosome Positionchr1:6781674-6782024 | Reverse length=78
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1108.95090358686
Replicate 2109.28509160781
Replicate 3105.57018196488
Condition 2: 8 Hour
Replicate 1152.08611768475
Replicate 2141.66521414913
Replicate 3126.49755972717
Condition 3: 24 Hour
Replicate 144.632258771872
Replicate 234.658263970907
Replicate 354.379390526453


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50549.p1 GENE.R_Transcript_50549~~R_Transcript_50549.p1 ORF type:complete len:161 (+),score=15.92 R_Transcript_50549:43-483(+)
ATGGCTGCTAAGGTTGGCGGTTCAGTGAGGTTGGTGACAATTTGCCTCATGTTGCTCATAGTTGCCAACATGGAACAGAAATGTTGGAAGTGGAAGGACAACCAGATTGGTGTTGGGACTACAGCAAGTACTTTAGAGGAAGGTGTAGAAGTAATTCCAAGTGCAACTCTACTTGCGTGTCAAGAGAAGGCAAACGTAGAGGCAAATGTATGCGAGACTCTCGTGGTGTTGCTTGCTTTTGTGAGATTAGATGCTTTCATGTTTAGCATATTTATATTGATCAGGGTCCTCCCATTCATGTTCCTAGCTATTCCACAACAGCTACTTTTAGTTTTATATACTACTATTTTGTTGCTTATTAATATATTGTGTGGCTCTTATGAAATAAAGAATTACATGGAAGTAATGGTTTATTGGTGTTCCTTCACATATATTCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50549.p1 GENE.R_Transcript_50549~~R_Transcript_50549.p1 ORF type:complete len:161 (+),score=15.92 R_Transcript_50549:43-483(+)
MAAKVGGSVRLVTICLMLLIVANMEQKCWKWKDNQIGVGTTASTLEEGVEVIPSATLLACQEKANVEANVCETLVVLLAFVRLDAFMFSIFILIRVLPFMFLAIPQQLLLVLYTTILLLINILCGSYEIKNYMEVMVYWCSFTYIL*

Click here to download the sequence:
Link to NCBI Protein BLAST