Transcript Information: R_Transcript_50571.p1


Annotated TAIR IDAT1G17630.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6064525-6066720 | Forward length=731
E-Value1.6E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61134318987096
Replicate 20
Replicate 30.71241049940187
Condition 2: 8 Hour
Replicate 10.35147174565424
Replicate 20.53494932634415
Replicate 30.65137358685599
Condition 3: 24 Hour
Replicate 10.87876774077336
Replicate 20.63316532700222
Replicate 30.83780687796736


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50571.p1 GENE.R_Transcript_50571~~R_Transcript_50571.p1 ORF type:complete len:418 (+),score=90.99,PPR_2|PF13041.2|0.004,PPR_2|PF13041.2|5.3e-08,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|0.003,PPR_2|PF13041.2|0.45,PPR_2|PF13041.2|1.7e-12,PPR_2|PF13041.2|6.1e+03,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|1.9,PPR|PF01535.16|0.016,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|0.00015,PPR|PF01535.16|2.8,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|16,PPR|PF01535.16|7.6e-07,PPR|PF01535.16|0.00099,PPR|PF01535.16|0.083,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|0.46,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.051,PPR_1|PF12854.3|8.3,PPR_1|PF12854.3|4.5e-07,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|0.11,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.081,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|9e+02,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|0.0013 R_Transcript_50571:643-1896(+)
ATGGGTTTGCAGAATAATCTCCATGTTGTGAATGAATTGTTGAGGATGTTTGCCAAGTCGGGGCGTATGGACATTGCATATCAACTGTTTGATAGAATGCCTGTGAGAAGCTACATATCCTGGAATACCCTAATTTCTGGCTGTTCTATGAACTATGATTGTCAGGGTGCAGTGGAAATGTTTAGGAGGATGGAGTTTGAAGGATGGGAGCCTAACATTGTAACCTGGACATCATTGTTATCGAGCTACGCACGTTGTGGTTATTATGAAGAAACATTGAAATGGTTTGTTTTTATGAGAAGGAGAGGAATAGGGACCAATGCTGAGGCACTTGCTGTTGTTTTATCATCTAGTGCTGATCTTAAGGCAGTCAAAGAGGGTACTACAGTTCATGGGTATGTTGTAAAGGGTGGGTTTGAGGGTTTTCTAATTGTCAAGAACTCCCTCATATGCATGCATGGTAAAAATGGGGATTTGAAAGGTGCGAATGATTTGTTTTCAGAGATGGAAACAAGAAATTTGGTAACTTGGAATTCTTTGGTAACAGCTTATGCAGCGTGTGATGAGGCTTTTGAGATATTTTCTCAGCTGGAAAAATCAGATGATTCTGCAATGTTGAGACCAGATGTAGTAACCTGGAGTGCTGTAATTGGCGGGTTTGCTTCCAAGGGACGAGGGAGGGAGGCGCTTGATCTATTCAGAAAGATGCAGCTGGTGAAAGTGAAACCCAATCCGATTACAATTTCCTCTGTTCTATCTGCTTGTGCAGATCTGGCAGTGTTGCCTCTTGGCCAAGAAGTTCACGCCTATGTCATTAGATTATCTATGGATGGTAGTATCTTGGTTGGAAATGGCTTGATTAACATGTACACCAAGTGTGGATGTCTTAAACAAGGGGGTTTGGTATTTGAAAAATTGGATGCTCGTGATCTGGTGTCATGGAATTCGATGATTGCAGGATATGGAGTGCATGGATATGGCAAATTCGCATTGGGATTTTTTGCGAAAATGCTTAGAGATGGAATCAAACTAGATGAGGTCACCTTTGTTGCTCTTCTTTCTGCTTGCGCTCACAGTGGGCTTGTATCTGAGGGGCGTAAAATATTTGCTAAGATGAAGGATGAGTTTGATGTTGAATTATTGATGGAACATTATGCTTGTGTTGTTGATCTTCTTGCTCGAGCTGGGCGTGTGGAAGAAGCCAAAGAAATTATCAGCCACATGCCAATGGAACCCAATGAAGTTCTTTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50571.p1 GENE.R_Transcript_50571~~R_Transcript_50571.p1 ORF type:complete len:418 (+),score=90.99,PPR_2|PF13041.2|0.004,PPR_2|PF13041.2|5.3e-08,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|0.003,PPR_2|PF13041.2|0.45,PPR_2|PF13041.2|1.7e-12,PPR_2|PF13041.2|6.1e+03,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|1.9,PPR|PF01535.16|0.016,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|0.00015,PPR|PF01535.16|2.8,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|16,PPR|PF01535.16|7.6e-07,PPR|PF01535.16|0.00099,PPR|PF01535.16|0.083,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|0.46,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.051,PPR_1|PF12854.3|8.3,PPR_1|PF12854.3|4.5e-07,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|0.11,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.081,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|9e+02,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|0.0013 R_Transcript_50571:643-1896(+)
MGLQNNLHVVNELLRMFAKSGRMDIAYQLFDRMPVRSYISWNTLISGCSMNYDCQGAVEMFRRMEFEGWEPNIVTWTSLLSSYARCGYYEETLKWFVFMRRRGIGTNAEALAVVLSSSADLKAVKEGTTVHGYVVKGGFEGFLIVKNSLICMHGKNGDLKGANDLFSEMETRNLVTWNSLVTAYAACDEAFEIFSQLEKSDDSAMLRPDVVTWSAVIGGFASKGRGREALDLFRKMQLVKVKPNPITISSVLSACADLAVLPLGQEVHAYVIRLSMDGSILVGNGLINMYTKCGCLKQGGLVFEKLDARDLVSWNSMIAGYGVHGYGKFALGFFAKMLRDGIKLDEVTFVALLSACAHSGLVSEGRKIFAKMKDEFDVELLMEHYACVVDLLARAGRVEEAKEIISHMPMEPNEVLW*

Click here to download the sequence:
Link to NCBI Protein BLAST