Transcript Information: R_Transcript_50573.p1


Annotated TAIR IDAT5G22950.1
Annotated Gene NameSNF7 family protein
Annotated Gene Symbol(s)VPS24.1
Annotation TypeOrtholog
Chromosome Positionchr5:7681380-7682720 | Forward length=229
E-Value8.1E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.361144749414
Replicate 233.007284497237
Replicate 335.110327057858
Condition 2: 8 Hour
Replicate 128.335171227161
Replicate 240.034766615223
Replicate 334.242339685621
Condition 3: 24 Hour
Replicate 136.592138157694
Replicate 230.626953393902
Replicate 332.210290303425


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50573.p1 GENE.R_Transcript_50573~~R_Transcript_50573.p1 ORF type:complete len:229 (+),score=73.23,Snf7|PF03357.17|2.7e-30,Snf7|PF03357.17|5.1e+03 R_Transcript_50573:316-1002(+)
ATGGAGAAGGTGAAGAGCTTGTTACTCCCAAAACCAAACCCTCAGCAGCTGTTGAGGGATTGGCAAAGGCGTCTACGCCAAGAGTGTCGCAACATTGACCGCCAAATCCGAGATATTCAGAGGGAAGAAAAAAGTGTACAGAAGGCCATCAGAGAGGCTGCCAAGAGAAATGATATGGGTTCTGCTAAGGCTCTTGCTGTAGAAATTGTGAGGTCACGAAAAACTGTCAATCGCCTATATGAAAATAAAGCTCAACTGAATTCGATATCAATGCACCTCGGAGAAAGTGTTGCAATTGCTCGTACAGTGGGTCATTTGCAAAAGAGTGCAGAGGTCATGAAACTTGTTAATAACCTAATGAAAGCCCCAGAGGTGGCTGTCACAATGCAGGAATTTAGCAAAGAGATGACCAAGGCTGGGGTCATTGAAGAATTTGTTAATGAGACACTTGATAATGCACTGGACTCTGAAGACATAGAAGAGGAAACAGAGGAAGAGGTTGACAAAGTTCTGACAGAATTGGCTAGTGAAACTGCCGCACAGCTTCCTGCTGCAGCCAGAAAAGAGAAGATGAAGTTACCTGCACAGGACACAAGTGTAAAGGATGAAGAACCAATTGCTGAGGGTGTAGATGATGAGGAAGAACTTGAAGAGATAAGGGCACGGCTTGCCAAAGTAAGATCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50573.p1 GENE.R_Transcript_50573~~R_Transcript_50573.p1 ORF type:complete len:229 (+),score=73.23,Snf7|PF03357.17|2.7e-30,Snf7|PF03357.17|5.1e+03 R_Transcript_50573:316-1002(+)
MEKVKSLLLPKPNPQQLLRDWQRRLRQECRNIDRQIRDIQREEKSVQKAIREAAKRNDMGSAKALAVEIVRSRKTVNRLYENKAQLNSISMHLGESVAIARTVGHLQKSAEVMKLVNNLMKAPEVAVTMQEFSKEMTKAGVIEEFVNETLDNALDSEDIEEETEEEVDKVLTELASETAAQLPAAARKEKMKLPAQDTSVKDEEPIAEGVDDEEELEEIRARLAKVRS*

Click here to download the sequence:
Link to NCBI Protein BLAST