Transcript Information: R_Transcript_50607.p1


Annotated TAIR IDAT4G30240.1
Annotated Gene NameSyntaxin/t-SNARE family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14808359-14809745 | Reverse length=300
E-Value1.1E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.862418294218
Replicate 228.185942680061
Replicate 336.373122728436
Condition 2: 8 Hour
Replicate 125.302060445487
Replicate 231.982837057696
Replicate 331.847825906679
Condition 3: 24 Hour
Replicate 129.706011170393
Replicate 220.919078887123
Replicate 330.841765695173


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50607.p1 GENE.R_Transcript_50607~~R_Transcript_50607.p1 ORF type:complete len:330 (+),score=63.03,Syntaxin-6_N|PF09177.7|1.6e-19 R_Transcript_50607:283-1272(+)
ATGTTGGTCGCAAATTCTTTTGATTTATGGCAAAGGGATGCTTTTTTCTCTGCTGCTGAAGAGGTCCAAGAATCTGCTGACATTTTGGAGTCAGCTTATCGAACATGGCTTAGGGAGAAGACAGAAGGGATATCATCGAGTGATTTAGAGGAACTTCGAAGAGAGCTGCAAACTGCTCTAGGCACCGCAAAGTGGCAGCTGGAAGAGTTTGAGAGGGCTGTGCGGTTAAGTTATGGAAATTGCCGTGATCAGAATAGAATCGCAAGGCACCAACAATTTGTTGTTGCCATTGAAAGCCAAATTTCCCAAGTTGAAGATGCACTGACGGATTCATTAAATGAAGATGGGAAACAGCCACTTCGATGGGTGAACTTGGATGAAGCTGAACGAGATGACCTAGCGATGTTTCTCTCTGGTACTCATGTGACTACCACAAAGAGTACAAGAGATGAATCTATTAAACCTACCATGAGCTTAGAGATGGAGAAACTTTGTAATAAAAAAGAGTTGGACTATGCTGCTTGTACAAGTAGTTGCAGCACGGAAGCCAGCATTCAAATAAAAGGTTTATGCTCTTTCAGCAATGATGTTGTGATCAATATCGGACTCCCTAATTGTGCAACTGAATCTAGTGCGATGGACACAAGAGGAAATATTAGCTCTGAAGTAGACAAAATGTCTAGTACAAAGCGGACACGGGTATCACCAAAATTTGCGACACTGAAAGTTGTGATTCCAGATGAAGATGATCAAATGAGGACTCATATGCCAGCTATTGAAGACACTCCTAAAGAAAAGGCTTTTAGAACATCAAATTGGCTTCGTGTGAGAGGAACTAACTGCATGAGTAAGATACTCCAATGCACTAGTGGTGTGAGCAGTAGATTACAAAGCTCTCAACGCTTACAATTCAGGTCTTCCTTGCGGCTTATGTTTGTTTTGCTGCTATCGACTTTTCTACTTGTGCCTTACTTTCTTCGTTCACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50607.p1 GENE.R_Transcript_50607~~R_Transcript_50607.p1 ORF type:complete len:330 (+),score=63.03,Syntaxin-6_N|PF09177.7|1.6e-19 R_Transcript_50607:283-1272(+)
MLVANSFDLWQRDAFFSAAEEVQESADILESAYRTWLREKTEGISSSDLEELRRELQTALGTAKWQLEEFERAVRLSYGNCRDQNRIARHQQFVVAIESQISQVEDALTDSLNEDGKQPLRWVNLDEAERDDLAMFLSGTHVTTTKSTRDESIKPTMSLEMEKLCNKKELDYAACTSSCSTEASIQIKGLCSFSNDVVINIGLPNCATESSAMDTRGNISSEVDKMSSTKRTRVSPKFATLKVVIPDEDDQMRTHMPAIEDTPKEKAFRTSNWLRVRGTNCMSKILQCTSGVSSRLQSSQRLQFRSSLRLMFVLLLSTFLLVPYFLRSH*

Click here to download the sequence:
Link to NCBI Protein BLAST