Transcript Information: R_Transcript_50614.p1


Annotated TAIR IDAT4G30240.1
Annotated Gene NameSyntaxin/t-SNARE family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14808359-14809745 | Reverse length=300
E-Value7.5E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.614493598668
Replicate 25.9337370741712
Replicate 310.58191682431
Condition 2: 8 Hour
Replicate 17.9845211784495
Replicate 29.6005960079003
Replicate 312.133957099498
Condition 3: 24 Hour
Replicate 17.8605535616596
Replicate 26.9522011720298
Replicate 39.7543031756825


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50614.p1 GENE.R_Transcript_50614~~R_Transcript_50614.p1 ORF type:3prime_partial len:184 (-),score=45.92,Syntaxin-6_N|PF09177.7|6.2e-20,Syntaxin-6_N|PF09177.7|4.7e+03 R_Transcript_50614:2-550(-)
ATGTTGGTTGCAAATTCTTTTGATTTATGGCAAAGGGATGCTTTTTTCTCTGCTGCTGAAGAGGTCCAAGAATCTGCTGACATTTTGGAGTCAGCTTATCGAACATGGCTTAGGGAGAAGACAGAAGGGATATCATCGAGTGATTTAGAGGAACTTCGAAGAGAGCTGCAAACTGCTCTAGGCACCGCAAAGTGGCAGCTGGAAGAGTTTGAGAGGGCTGTGCGGTTAAGTTATGGAAATTGCCGTGATCATAATAGAATCGCAAGGCACCAACAATTTGTTGTTGCCATTGAAAGCCAAATTTCCCAAGTTGAAGATGCACTGACAGAGTCGTTAAATGAAGAAGGGAAACAGCCACTTCGATGGGTGAACTTGGATGAAGCTGAACGAGAAGACCTAGCGAAGTTTCTGTCTGGTACTCGTGTGACTACCACAAAGAGTACAAGAGATGAATCTATTAAAACTACCATGAGCTTAGAGATGAAGAAAATTTGTAATAAAAAAGAGTTGGACTATGCTGCTTGTAGCAGTAGTTGCAGCACGGAAGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50614.p1 GENE.R_Transcript_50614~~R_Transcript_50614.p1 ORF type:3prime_partial len:184 (-),score=45.92,Syntaxin-6_N|PF09177.7|6.2e-20,Syntaxin-6_N|PF09177.7|4.7e+03 R_Transcript_50614:2-550(-)
MLVANSFDLWQRDAFFSAAEEVQESADILESAYRTWLREKTEGISSSDLEELRRELQTALGTAKWQLEEFERAVRLSYGNCRDHNRIARHQQFVVAIESQISQVEDALTESLNEEGKQPLRWVNLDEAEREDLAKFLSGTRVTTTKSTRDESIKTTMSLEMKKICNKKELDYAACSSSCSTEA

Click here to download the sequence:
Link to NCBI Protein BLAST