Transcript Information: R_Transcript_50638.p1


Annotated TAIR IDAT1G40087.1
Annotated Gene NamePlant transposase (Ptta/En/Spm family)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:14999762-15001868 | Reverse length=390
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0203695979687
Replicate 212.920800256183
Replicate 310.396134755177
Condition 2: 8 Hour
Replicate 113.655578528271
Replicate 210.664420570412
Replicate 313.474080191287
Condition 3: 24 Hour
Replicate 112.538494716669
Replicate 212.809015740297
Replicate 38.8392653543239


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50638.p1 GENE.R_Transcript_50638~~R_Transcript_50638.p1 ORF type:complete len:260 (+),score=65.83,Transposase_24|PF03004.10|2.7e-14 R_Transcript_50638:2245-3024(+)
ATGAGACTGAAAAATCGTCCGAAAAGAGTCCCAAAACAAATGTTTAAGGAGTTGCTGGCAATATGGAATACTGAATCCCATAAGAAAGCAAGTGCAAGAAATAAGAGTAATCGTCTGGTATTGAAGGAGAAGAACATCATGCATACTGAAGGGCCAAGAAGTTTTGCTAGGGTGAGAGAAGATTGGAAAAAGAAAAATGAAACAACAAGAGATCCAACGCCTGTAGAAGTTTACATGGAAACTCGAAAAGAAAAGATTAAGAAGCGGAAAGATGGTGATCCAAGAGACACTATTATTAATGAACTTAAGAACTCAAACTCACAACCGGCCCAAAGTGGTGACATTGAGGGTGATGTTGCTTCAATCTTTGGCTGTAAAAATGAGAAACGTCGTCGATTGCGCCTATATGGAAGAGGTGTTTCATGTTCTTTGTTGAAGCAACAAGCTTTTGAGGAAGAATGTAAAAAGAAGCAACAAGTGGAGTATGAAGAAAAGAGACAAAAGGAGAGGGCTGAGTTAGCTGGTGGTTTACGATTACTTATTTCTGAAATACGTCATGCTTGTCCAAATTTCACAATTGATGAAGGTATATTTGGCTCTTTGTTGGTCGGTGATCAATCATCTGGAAACGTTACAACTAGTCATGGTGCTTTGGTTCTTCCTCAATCTTCTGGTTTTACACATATGCCACACCATCAACTCTCTACTTCTACACATAGGCCAAATGATCAGGATTTGGACCTTTCAGAAGATGATCAAGATGAAGATATATGCCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50638.p1 GENE.R_Transcript_50638~~R_Transcript_50638.p1 ORF type:complete len:260 (+),score=65.83,Transposase_24|PF03004.10|2.7e-14 R_Transcript_50638:2245-3024(+)
MRLKNRPKRVPKQMFKELLAIWNTESHKKASARNKSNRLVLKEKNIMHTEGPRSFARVREDWKKKNETTRDPTPVEVYMETRKEKIKKRKDGDPRDTIINELKNSNSQPAQSGDIEGDVASIFGCKNEKRRRLRLYGRGVSCSLLKQQAFEEECKKKQQVEYEEKRQKERAELAGGLRLLISEIRHACPNFTIDEGIFGSLLVGDQSSGNVTTSHGALVLPQSSGFTHMPHHQLSTSTHRPNDQDLDLSEDDQDEDICQ*

Click here to download the sequence:
Link to NCBI Protein BLAST