Transcript Information: R_Transcript_50686.p1


Annotated TAIR IDAT3G48440.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17941402-17943576 | Forward length=448
E-Value2.1E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.230668568095
Replicate 217.304154368517
Replicate 318.684521132455
Condition 2: 8 Hour
Replicate 123.448328296938
Replicate 228.093226550473
Replicate 328.650317610568
Condition 3: 24 Hour
Replicate 124.660187000945
Replicate 218.223624930774
Replicate 323.7425949146


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50686.p1 GENE.R_Transcript_50686~~R_Transcript_50686.p1 ORF type:complete len:472 (+),score=109.96,zf-CCCH|PF00642.20|8.1e-07,zf-CCCH|PF00642.20|0.00013,zf-CCCH|PF00642.20|2.2e-10,zf-CCCH|PF00642.20|8e-07,zf-CCCH|PF00642.20|6.1e-09,Torus|PF16131.1|1.4e+04,Torus|PF16131.1|0.066,Torus|PF16131.1|49,Torus|PF16131.1|0.57,Torus|PF16131.1|21,Torus|PF16131.1|0.047 R_Transcript_50686:283-1698(+)
ATGGAGGTAATCTCTGAATCAACATCAACGTCAACATCAATTCGCTCTCCACAGCCTGAAGATTCAATCAACGATCAACTCGAAAACCTCTCACTTGATGAAGAACCTCAAAACAACACCACCACCGACAACAACAACAACAACAACAACAACAACAACAACAAAAGCAACAGCAATGGAGGAGAAGAAGGAGACGTAGTAATTAGGGAAAACTTAGAGGAGAGAGAAAATGATGAAGAAGAAAATGGGGAAGAAGACAAGGAAGTTCAGGATGAGGAGGTTCAGGATGAAGAAGTTGTGAATAATGTGGTGATTGAAAAAAGTGGAAATGGTAATGAGAATAAAAATGGAGATAGAGGAAATTTGGAGAGAGAAAAGAGTAAGAGAAGTAGTTGTAGTAAGTATCCAGTGAGACTTGAAGCTGAGGATTGTTCTTTTTATGTGCGTACTGGCATGTGTAAATTTGGTATGAATTGCAAGTTTAATCACCCCCCTAATAGGAAAACTCTGGGTGGGAAGGTGAAGGGAAAGGAAGCATCTGGTGATGGGGCTCCCACTCAGAAGGTGAAGGATAAGGAGGATGGTTCGGATAAAGAAGGCCAGATTGATTGCAAGTACTTTGACCTCCCTGCAGGCTGTAAGTTTGGGAAAGCCTGTAAATTCAACCATAGCAGAAAAAGCACCCCAATGATAGAGCTTAACTTCATGGGTTTGCCGATTCGTCCGGGAGAAAAAGAGTGCCCTTATTACATGCGTAATGGCTCATGCAAGTATGGGGCAAACTGTAGGTTTAACCATCCTGATCCGACAACTTTAGGAGGATCTGATGCCCAGCCTGCCTACAGTAATGGAGGATCTGTCATATCATCTACTACCTCGCAATCAACTTTGGCTCCATGGTCTCCACCAGAAAATCCTCCATATGTGCCATTGATGTTTCCACCAACTCAAGGTGTGCCGTCTCGGCCAGAGTGGAATGCTTATCGGGCTCCTGTATATCCAACAGAGAGGAATATGCACATGCCAGCAGCATATGCAATTAATAGCCAGTCATTGGAAAGAAATGCTTATACCCATCAACAGGAGCAGATATTGGTTGATGAGTATCCAGAAAGGCCTGGTCAACCTGAGTGCAGCTACTTTCTGAAAACTGGCAACTGTAAATACAGATCTGCTTGTAAATTTCATCATCCCAAAAGTGCAAATGCAAAGCCACCACCATGTTCTCTCAGTGATTTGGGCTTGCCTCTGAGACCTGGTGAAAATGTTTGTAGCTATTACAGCCGGTATGGAATTTGCAAGTATGGACCGGCATGTAAATATGACCATCCAGTAAATTATGCCCATTCAGAATCTCTGGCCGTTCCAGCAGTAGATCACACACCAGCATTATGTAATTCTGTGGCGAGTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50686.p1 GENE.R_Transcript_50686~~R_Transcript_50686.p1 ORF type:complete len:472 (+),score=109.96,zf-CCCH|PF00642.20|8.1e-07,zf-CCCH|PF00642.20|0.00013,zf-CCCH|PF00642.20|2.2e-10,zf-CCCH|PF00642.20|8e-07,zf-CCCH|PF00642.20|6.1e-09,Torus|PF16131.1|1.4e+04,Torus|PF16131.1|0.066,Torus|PF16131.1|49,Torus|PF16131.1|0.57,Torus|PF16131.1|21,Torus|PF16131.1|0.047 R_Transcript_50686:283-1698(+)
MEVISESTSTSTSIRSPQPEDSINDQLENLSLDEEPQNNTTTDNNNNNNNNNNNKSNSNGGEEGDVVIRENLEERENDEEENGEEDKEVQDEEVQDEEVVNNVVIEKSGNGNENKNGDRGNLEREKSKRSSCSKYPVRLEAEDCSFYVRTGMCKFGMNCKFNHPPNRKTLGGKVKGKEASGDGAPTQKVKDKEDGSDKEGQIDCKYFDLPAGCKFGKACKFNHSRKSTPMIELNFMGLPIRPGEKECPYYMRNGSCKYGANCRFNHPDPTTLGGSDAQPAYSNGGSVISSTTSQSTLAPWSPPENPPYVPLMFPPTQGVPSRPEWNAYRAPVYPTERNMHMPAAYAINSQSLERNAYTHQQEQILVDEYPERPGQPECSYFLKTGNCKYRSACKFHHPKSANAKPPPCSLSDLGLPLRPGENVCSYYSRYGICKYGPACKYDHPVNYAHSESLAVPAVDHTPALCNSVASS*

Click here to download the sequence:
Link to NCBI Protein BLAST