Transcript Information: R_Transcript_50714.p1


Annotated TAIR IDAT4G34030.1
Annotated Gene Name3-methylcrotonyl-CoA carboxylase
Annotated Gene Symbol(s)MCCB
Annotation TypeOrtholog
Chromosome Positionchr4:16301298-16303949 | Forward length=587
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.909163904355
Replicate 233.144418964588
Replicate 346.011288124914
Condition 2: 8 Hour
Replicate 133.705067984377
Replicate 258.509043159579
Replicate 360.223219346742
Condition 3: 24 Hour
Replicate 128.23136225583
Replicate 218.62698030655
Replicate 327.066660718167


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50714.p1 GENE.R_Transcript_50714~~R_Transcript_50714.p1 ORF type:complete len:579 (+),score=120.67,Carboxyl_trans|PF01039.18|8.6e-152 R_Transcript_50714:321-2057(+)
ATGTCAAGAATTTTTGGGTTTCTCGGAAGGAAAACATCGAGATTATCATCATTTCCATATTCATGGCGGAAAATTTCATCAATCGATTATCATCAAAGGAGAGAAATGTGTTTGGGAGTTCTTCCGGATACCGTCGATCGGAATTCCGATGGATTCACTCGCAACTCGCTTCACATGCAGGGTTTGCTCTCTCAGCTCCATTCTCACATCTCCAAGGTTTTGGATGGTGGAGGACCGGAAGCTGTGAAGAGGAACAGAAGTAGGAGTAAGCTTTTGCCTAGAGAGAGAATCGAACGCCTTATTGATCCTGGTTCTTCCTTTCTTGAGCTTTCTCAGCTTGCAGGTCATGAACTGTATGAAGACAATCTTCCTTCTGGTGGAACAATAACAGGAATTGGGCCTGTTCATGGGAAACTCTGTATGTTCGTGGCTAACGATCCAACTGTCAAGGGGGGAACTTATTATCCCATAACAGTGAAGAAGCATTTGAGGGCACAGGAGATTGCTGCTCAGTGCAAACTACCATGCTTGTATCTTGTTGATAGTGGTGGTGCTTTCCTTCCGAAACAGGCTGAAGTCTTTCCTGACAAGGAGAATTTTGGCAGAATATTCTATAATCAAGCGACAATGTCTGCTGTAGGCATACCTCAAATTGCTTTAGTTTTAGGTTCATGTACTGCTGGGGGTGCTTATATACCTGCGATGGCTGATGAGAGTGTCATGGTGAAAGGAAATGGAACTATATTTCTTGCTGGGCCTCCACTTGTGAAGGCTGCTACTGGCGAAGAAATATCTGCAGAGGATTTAGGAGGCGCCAGTGTGCACTGCAAGATATCTGGTGTTTCTGATTATTTTGCTGAAGATGAACTGCATGCTCTAGCTACAGGGAGGAACATTGTTAAGAACTTATATATGGCTGGGCAAAGAGAATTACCTGGTGCAATGCATTATGTTACAGCAGGATTTAAGGAACCTCTATATGATGTGAAGGAGCTTAGATCTATTGCCCCAATGGATCACAAACGACAGTTTGATGTTCGATCTGTTATTGCTCGTATTGTTGATGGTAGTGAATTTGATGAATTCAAGAAATTGTATGGCACTACTCTTGTAACAGGCTTTGCGAGAATTTTTGGACAGCCTGTTGGGATCCTTGGAAATAATGGAGTATTGTTTCACGAGTCCGCACTCAAAGGGGCCCACTTCATTGAACTATGCACTCAGCGTAAAATACCCTTGATTTTCCTTCAGAACATTACTGGCTTTATGGTCGGCTCAAGAGCTGAGGCAAACGGCATAGCAAAAGCTGGTGCAAAAATGGTGATGGCTGTTTCATGTGCAAAGGTTCCAAAAATCACCGTAATAATCGGAGGCAGTTTTGGTGCTGGAAACTATGCAATGTGTGGACGTGCATATAGTCCCAATTTTATGTTCTTCTGGCCGAATGCAAGAATATCTATAATGGGAGGTGCACAGGCCGCAGGTGTTCTATCACAAATAGAAAGGGGCAACAAGAAAAGGCGAGGAGTTCAGTGGACTACTGAAGAAGAAGAAGCGTTCAAAGCCAGGGTTGAGGAGGGCTATGATAAAGAAGGCAGTCCATATTACTCCACTGCTAGACTTTGGGATGATGGTGTTATCGATCCAGCAGATACCAGAAAAATTATAGGTCTATGTGTCAATGCTGCAATGAACCACACCCCACAAGAAACAAAGTATGGTGTATTTAGAATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50714.p1 GENE.R_Transcript_50714~~R_Transcript_50714.p1 ORF type:complete len:579 (+),score=120.67,Carboxyl_trans|PF01039.18|8.6e-152 R_Transcript_50714:321-2057(+)
MSRIFGFLGRKTSRLSSFPYSWRKISSIDYHQRREMCLGVLPDTVDRNSDGFTRNSLHMQGLLSQLHSHISKVLDGGGPEAVKRNRSRSKLLPRERIERLIDPGSSFLELSQLAGHELYEDNLPSGGTITGIGPVHGKLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCKLPCLYLVDSGGAFLPKQAEVFPDKENFGRIFYNQATMSAVGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKISGVSDYFAEDELHALATGRNIVKNLYMAGQRELPGAMHYVTAGFKEPLYDVKELRSIAPMDHKRQFDVRSVIARIVDGSEFDEFKKLYGTTLVTGFARIFGQPVGILGNNGVLFHESALKGAHFIELCTQRKIPLIFLQNITGFMVGSRAEANGIAKAGAKMVMAVSCAKVPKITVIIGGSFGAGNYAMCGRAYSPNFMFFWPNARISIMGGAQAAGVLSQIERGNKKRRGVQWTTEEEEAFKARVEEGYDKEGSPYYSTARLWDDGVIDPADTRKIIGLCVNAAMNHTPQETKYGVFRM*

Click here to download the sequence:
Link to NCBI Protein BLAST