Transcript Information: R_Transcript_5074.p1


Annotated TAIR IDAT4G25230.1
Annotated Gene NameRPM1 interacting protein 2
Annotated Gene Symbol(s)RIN2
Annotation TypeOrtholog
Chromosome Positionchr4:12924446-12928671 | Forward length=578
E-Value3.4E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.301210333446
Replicate 222.175867855416
Replicate 329.148180143419
Condition 2: 8 Hour
Replicate 129.506842871821
Replicate 240.639018402379
Replicate 344.512236156174
Condition 3: 24 Hour
Replicate 136.113404627849
Replicate 233.888277003218
Replicate 341.131669762737


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5074.p1 GENE.R_Transcript_5074~~R_Transcript_5074.p1 ORF type:complete len:356 (+),score=56.73,zf-RING_2|PF13639.2|5.4e-11,CUE|PF02845.12|2.8e+03,CUE|PF02845.12|6.8e-09,zf-C3HC4|PF00097.21|1.3e-08,zf-rbx1|PF12678.3|1.7e-06,zf-RING_UBOX|PF13445.2|6.6e-07,zf-RING_11|PF17123.1|2.9e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|3.9e-06 R_Transcript_5074:751-1818(+)
ATGAATGTTTGGAAATTTTTTCTTTCTTTTTTTATGCATGTTTGTTTTTGTTTTTATATTCCTTTGATTGAACAAGTTTTTCAGGTTCTTTATGGGAATGGAAGAGCACTGTTCGAAATATGGTTTTTTTTCCTTGACACGATGACTCTGTTAATGGCCATGGCATTTCATCTGGTCGATGCAATCCTCTTCTTAAATATACGTGCTCTGATAAGTGCAATAGTGAAGCGTATCAAAGGATTTATAAAATTGAGGATAGCTTTAGGTGCTCTTCACAAGGCACTTCCTGATGCCACATCAGAGGAAATACGAGTATACGATGATGAATGTGCCATCTGCAGGGAGCCAATGGCAAAGGCTAAAAGGCTACCTTGCAATCACCTCTTTCATCTTGCTTGCTTGCGATCATGGTTGGACCAAGGTCTTAGTGATATTTATACATGCCCTACCTGTAGGAAACCCCTTTTTGTCGGCAGAGTTGAAGTTGAGGCGAACTCTCATAATACAGCAGTATCAAGTGATGAACAACTTGCTCGTCAATTAAGTTCAGGACTTGATCCGCCAAATGCTGGTGGACAAGGCGGAGTTTTCCCTAATCAAAACCAAAATTCTTTGGACGCTAGTGCTTGGAGAGGATCAGGAGCAGACGCAAATTGGTTGCAGCCTTGGGCAAGTCAGGGTCTTGATGGAGCTGGTCCATCAACTGCCATAAGATCTGTTGGATTGGGAAGAGTCCAAATGATGATGAGGCATCTTGCTTCTGTAGGAGAAACCTATGCCCAGACTGCACTTGAAGATACTTCTTGGAGCCTTTGGCCGACAAATTCCTCTCAGGCTACTACATCTGGTACTGCATTTCCACCACCTCCACTAAGATACCCTACACCTATGGGTGCCACGCATAGGAGGGCCGCCTCCCATCCAGCGAATGATAGCATTGCAAACTTACTTGCCATGGCAGAGACTGTGAGGGAGGTGCTCCCACACATCCCTGATGAATTAATTTTTCAGGACCTTCAGCAAACAAATTCTGTCGCTGCGACGGTTAACAACCTTCTTCAGATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5074.p1 GENE.R_Transcript_5074~~R_Transcript_5074.p1 ORF type:complete len:356 (+),score=56.73,zf-RING_2|PF13639.2|5.4e-11,CUE|PF02845.12|2.8e+03,CUE|PF02845.12|6.8e-09,zf-C3HC4|PF00097.21|1.3e-08,zf-rbx1|PF12678.3|1.7e-06,zf-RING_UBOX|PF13445.2|6.6e-07,zf-RING_11|PF17123.1|2.9e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|3.9e-06 R_Transcript_5074:751-1818(+)
MNVWKFFLSFFMHVCFCFYIPLIEQVFQVLYGNGRALFEIWFFFLDTMTLLMAMAFHLVDAILFLNIRALISAIVKRIKGFIKLRIALGALHKALPDATSEEIRVYDDECAICREPMAKAKRLPCNHLFHLACLRSWLDQGLSDIYTCPTCRKPLFVGRVEVEANSHNTAVSSDEQLARQLSSGLDPPNAGGQGGVFPNQNQNSLDASAWRGSGADANWLQPWASQGLDGAGPSTAIRSVGLGRVQMMMRHLASVGETYAQTALEDTSWSLWPTNSSQATTSGTAFPPPPLRYPTPMGATHRRAASHPANDSIANLLAMAETVREVLPHIPDELIFQDLQQTNSVAATVNNLLQM*

Click here to download the sequence:
Link to NCBI Protein BLAST