Transcript Information: R_Transcript_50761.p1


Annotated TAIR IDAT5G54240.1
Annotated Gene NameProtein of unknown function (DUF1223)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22023339-22024461 | Reverse length=282
E-Value1.7E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8798188428361
Replicate 210.21441641874
Replicate 34.1789318587575
Condition 2: 8 Hour
Replicate 16.2869112702386
Replicate 28.7630482891133
Replicate 36.6228849560871
Condition 3: 24 Hour
Replicate 13.4126470203344
Replicate 25.0667486640515
Replicate 37.5423847231876


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50761.p1 GENE.R_Transcript_50761~~R_Transcript_50761.p1 ORF type:complete len:148 (+),score=17.72,DUF1223|PF06764.7|5.1e-16 R_Transcript_50761:802-1245(+)
ATGTTTCAGCTTGTGCATCAAAACATAACCGTAAAAATGCTATATGAAGTGACTTTGGTTTTATTGATTCTTTCCATCGAGCAGCCAACCTTCCAAAAGCCGGCACCAGACACTTTGCAAGTCACCCTCACAGGGCCACTGAGAATGAAGATAGACCAGCAAGGAGCTAACATCATGGTGGCGTTGTACGAGAGTGGCTTGGTGACTGACTGTCCCAAGGGAGAGAACCAAGGGAGGGTGATTTCAAATGATTACGCTGTCAGGAGGCTCGAAAAACTCTGTTCTGTCAAGGATCATTCTGCCAAGAAGAACATCTCCGGGACTGTCAACTTCGCGCTATGGGAAGGCTTCAACAGCACCAAGTGTGGCCTGGCTGTCTTTGTTCAGAACAGCTCCCACCAAATCTTCGGCGCACAGAAACTTGACCTGCCAGATAATATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50761.p1 GENE.R_Transcript_50761~~R_Transcript_50761.p1 ORF type:complete len:148 (+),score=17.72,DUF1223|PF06764.7|5.1e-16 R_Transcript_50761:802-1245(+)
MFQLVHQNITVKMLYEVTLVLLILSIEQPTFQKPAPDTLQVTLTGPLRMKIDQQGANIMVALYESGLVTDCPKGENQGRVISNDYAVRRLEKLCSVKDHSAKKNISGTVNFALWEGFNSTKCGLAVFVQNSSHQIFGAQKLDLPDNI*

Click here to download the sequence:
Link to NCBI Protein BLAST