Transcript Information: R_Transcript_50882.p1


Annotated TAIR IDAT5G19450.1
Annotated Gene Namecalcium-dependent protein kinase 19
Annotated Gene Symbol(s)CDPK19, CPK8
Annotation TypeOrtholog
Chromosome Positionchr5:6558672-6561471 | Reverse length=533
E-Value4e-323
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.449906083304
Replicate 28.3036216335642
Replicate 38.5414953748365
Condition 2: 8 Hour
Replicate 17.1935874421285
Replicate 27.6641817233442
Replicate 39.6398384085671
Condition 3: 24 Hour
Replicate 18.2578929952759
Replicate 26.2718344491095
Replicate 38.1615170018939


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50882.p1 GENE.R_Transcript_50882~~R_Transcript_50882.p1 ORF type:complete len:531 (+),score=135.44,Pkinase|PF00069.21|2.6e-76,Pkinase_Tyr|PF07714.13|1.6e-26,EF-hand_7|PF13499.2|1.2e+04,EF-hand_7|PF13499.2|3.5e-06,EF-hand_7|PF13499.2|5.5e-16,EF-hand_1|PF00036.28|2.3,EF-hand_1|PF00036.28|0.0026,EF-hand_1|PF00036.28|8.5e-06,EF-hand_1|PF00036.28|9.9e-08,EF-hand_6|PF13405.2|4.9e+02,EF-hand_6|PF13405.2|0.063,EF-hand_6|PF13405.2|0.64,EF-hand_6|PF13405.2|2.1e-05,EF-hand_6|PF13405.2|0.017,EF-hand_8|PF13833.2|3.1e-05,EF-hand_8|PF13833.2|0.71,EF-hand_8|PF13833.2|7.6e-09,EF-hand_5|PF13202.2|2.5e+03,EF-hand_5|PF13202.2|0.74,EF-hand_5|PF13202.2|0.0022,EF-hand_5|PF13202.2|5.4e-06 R_Transcript_50882:644-2236(+)
ATGGGTAATTGCTGTGCTGCCCCAAGTGGGGAGAAAAAAACCAAGAAAAAGAACAAGCCAAACCCTTTTGCAGCTGATTATGCTGTGAATCAAGGATCTGGGGCTAACACCAAGCTCTATGTGTTAAAAGACCCTATTGGCCGTGACATTAATGCTCACTATGAGCTTGGGAGGGAGCTAGGTAGAGGTGAGTTTGGTATCACTTATTTGGCTACTGATTTGGAAAGTGGTGATAAGTATGCTTGTAAGTCAATACTGAAGAAAAAGCTAAGAACTGCTGTTGATATTGAGGATGTTAGAAGAGAGGTTGAGATTATGAGACATATGCCTAAACACCCTAATATTGTCACCCTTAAGGATACTTATGAGGATGAGTATGCTGTTCATTTGGTTATGGAGTTGTGTGAGGGTGGTGAGCTCTTTGATCGAATCGTCGCGAGAGGTCATTATACTGAGAGGGCTGCTGCTGTTATCATGCGCACCATTGTTGAAGTTGTTCAGATGTGCCATAAGCATAGAGTGATGCATCGTGACCTAAAACCAGAGAATTTCTTATTTGCAAATAAGAAGGAAACAGCAGCCTTGAAAGCAATTGACTTTGGACTCTCAGTGTTCTTCACACCCGGTGAAAGATTTAATGAAATAGTTGGTAGCCCATACTATATGGCCCCTGAAGTTCTGAAAAGGAATTATGGACCAGAAGTAGATATCTGGAGTGCCGGAGTGATCCTCTATATTTTGCTTTGCGGTGTTCCACCTTTCTGGGCAGAAACTGAACAAGGGGTAGCTCAAGCAATTATTAGGTCCGCCTTAGACTTCCAGAGGGATCCCTGGCCTAGAGTTTCCGACAATGCTAAAGACCTTGTGCGGAAGATGCTCGACCCTGATCCTTCAAAGCGACTTACTGCTCAGCAAGTGTTAGATCATCCTTGGTTACAGAATGCAAAAAAGGCTCCTAATGTTTCTTTGGGTGAAACTGTGAAAGCTAGGTTGAAGCAGTTCTCTGTAATGAACAAGCTCAAGAAGAGAGCTTTAAGGGTCATAGCCGAGCATTTGTCAGTGGAGGAAGTTGCTGGAATCAAGGAAGGATTTGCCCTGATGGATACTGGCAAAATGGGCAAGATTGATATTGAACAGCTAAAAGCTGGGGTACATAAGCTTGGTCATCAGGTCCCAGATACAGATCTTCAGATTTTAATGGAAGCTGGAGATCTCGATAAGGATGGATACTTGGACTATGGAGAGTTTGTAGCAATAGCCGTTCATCTGAGAAAGATGGGTAATGATGAGCACCTGCACAAAGCCTTTGCATATTTCGACCAAAATCAAAGCGGATACATAGAGATAGAAGAGCTGCGGAGTGCATTAGCTGATGAGCTTGATGACAACAGTGAGGAGGTCATAAATGCCATCATTCGAGATGTAGATACAGACAAGGATGGCCGAATAAGTTATGAGGAGTTTGCCACAATGATGAAGGCTGGAACAGATTGGAGAAAAGCTTCAAGGCAGTATTCGAGAGAACGGTTCAATAGTCTCAGCTTGAAGTTGATGAAGGATGGTTCACTACAATTGCCGAATGAGGGCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50882.p1 GENE.R_Transcript_50882~~R_Transcript_50882.p1 ORF type:complete len:531 (+),score=135.44,Pkinase|PF00069.21|2.6e-76,Pkinase_Tyr|PF07714.13|1.6e-26,EF-hand_7|PF13499.2|1.2e+04,EF-hand_7|PF13499.2|3.5e-06,EF-hand_7|PF13499.2|5.5e-16,EF-hand_1|PF00036.28|2.3,EF-hand_1|PF00036.28|0.0026,EF-hand_1|PF00036.28|8.5e-06,EF-hand_1|PF00036.28|9.9e-08,EF-hand_6|PF13405.2|4.9e+02,EF-hand_6|PF13405.2|0.063,EF-hand_6|PF13405.2|0.64,EF-hand_6|PF13405.2|2.1e-05,EF-hand_6|PF13405.2|0.017,EF-hand_8|PF13833.2|3.1e-05,EF-hand_8|PF13833.2|0.71,EF-hand_8|PF13833.2|7.6e-09,EF-hand_5|PF13202.2|2.5e+03,EF-hand_5|PF13202.2|0.74,EF-hand_5|PF13202.2|0.0022,EF-hand_5|PF13202.2|5.4e-06 R_Transcript_50882:644-2236(+)
MGNCCAAPSGEKKTKKKNKPNPFAADYAVNQGSGANTKLYVLKDPIGRDINAHYELGRELGRGEFGITYLATDLESGDKYACKSILKKKLRTAVDIEDVRREVEIMRHMPKHPNIVTLKDTYEDEYAVHLVMELCEGGELFDRIVARGHYTERAAAVIMRTIVEVVQMCHKHRVMHRDLKPENFLFANKKETAALKAIDFGLSVFFTPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSALDFQRDPWPRVSDNAKDLVRKMLDPDPSKRLTAQQVLDHPWLQNAKKAPNVSLGETVKARLKQFSVMNKLKKRALRVIAEHLSVEEVAGIKEGFALMDTGKMGKIDIEQLKAGVHKLGHQVPDTDLQILMEAGDLDKDGYLDYGEFVAIAVHLRKMGNDEHLHKAFAYFDQNQSGYIEIEELRSALADELDDNSEEVINAIIRDVDTDKDGRISYEEFATMMKAGTDWRKASRQYSRERFNSLSLKLMKDGSLQLPNEGR*

Click here to download the sequence:
Link to NCBI Protein BLAST