Transcript Information: R_Transcript_50917.p1


Annotated TAIR IDAT5G39120.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15662705-15663486 | Reverse length=221
E-Value2.3E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1277.86873596246
Replicate 2178.84348747454
Replicate 3174.45934972784
Condition 2: 8 Hour
Replicate 160.668102882683
Replicate 267.581772350369
Replicate 381.358111887806
Condition 3: 24 Hour
Replicate 1110.17697665081
Replicate 2122.0916117157
Replicate 3169.23885945405


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50917.p1 GENE.R_Transcript_50917~~R_Transcript_50917.p1 ORF type:3prime_partial len:224 (+),score=13.12,Cupin_1|PF00190.18|6.1e-47,Cupin_2|PF07883.7|5.2e-10 R_Transcript_50917:63-731(+)
ATGTCGCGTCACAATATCCTTACCTACATCGGTCTTATAGCTATCGCTTCTTATGTGGCGTATGCTACTGATCCCACCCAACTCCAAGATTTCTGTGTTGGGGTCAATGATCCTCATGGTGCATTGTTCGTGAATGGGCTATTCTGCAAGAATCCAATGGAAGCCACACCCGAAGATTTCTTCTTCGAAGGGCTAGATAAGCCCGGAGATACACACAACCCTGTCGGATCTAATGTCACCTTAGTCAGTGCGTTACAATTGGGAGGGCTCAATACTCTTGGGATATCGCTCGCAAGGATTGATTTTGCACCTCATGGTGGCCTTAATCCTCCTCACATACACCCTCGAGCGACAGAGGTAATTGTTGTCCTTGAAGGAGAGTTGTATGTCGGTTTTGTCACCTCCAACCTAGCAGAAGGCGGAAACAAGCTCTTTGCTAAGGTTCTTAAGCCGGGAGACGTTTTCGTATTCCCTCAAGGGCTCATTCACTTCCAATTCAACGTTGGAGAATACCCAGCCGCCCTTATTGCTGGACTGAGCAGCCAGAACCCTGGTGTAAGTACCATTGCTAATGCGGTGTTCGGAGCAAAGCCACCTATCTCTGTTGATGTACTCAGCAAAGCCTTCCAACTTGATCCCAAAATAGTCAAGTTTCTTCAGTCCCGCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50917.p1 GENE.R_Transcript_50917~~R_Transcript_50917.p1 ORF type:3prime_partial len:224 (+),score=13.12,Cupin_1|PF00190.18|6.1e-47,Cupin_2|PF07883.7|5.2e-10 R_Transcript_50917:63-731(+)
MSRHNILTYIGLIAIASYVAYATDPTQLQDFCVGVNDPHGALFVNGLFCKNPMEATPEDFFFEGLDKPGDTHNPVGSNVTLVSALQLGGLNTLGISLARIDFAPHGGLNPPHIHPRATEVIVVLEGELYVGFVTSNLAEGGNKLFAKVLKPGDVFVFPQGLIHFQFNVGEYPAALIAGLSSQNPGVSTIANAVFGAKPPISVDVLSKAFQLDPKIVKFLQSRF

Click here to download the sequence:
Link to NCBI Protein BLAST