Transcript Information: R_Transcript_50918.p2


Annotated TAIR IDAT5G39160.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15679195-15679970 | Reverse length=222
E-Value7.2E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.285646796445
Replicate 217.665156600251
Replicate 314.20658245146
Condition 2: 8 Hour
Replicate 18.9467583461088
Replicate 215.050593546952
Replicate 310.123013615216
Condition 3: 24 Hour
Replicate 18.609177710389
Replicate 27.2103730988426
Replicate 38.2078892575865


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50918.p2 GENE.R_Transcript_50918~~R_Transcript_50918.p2 ORF type:3prime_partial len:208 (+),score=20.38,Cupin_1|PF00190.18|4.8e-47,Cupin_2|PF07883.7|4.4e-10 R_Transcript_50918:1929-2549(+)
ATGGGTTATGTGTTGGATCAGAAATGGAAGAATATTTGGGTCAGCACAGAAGAAAAAAGATCAAAGAGAAATTCAGTGTTCGTGAATGGGCTATTCTGCAAGAATCCAATGGAAGCCACACCCGAAGATTTCTTCTTCGAAGGGCTAGATAAGCCCGGAGATACACACAACCCTGTCGGATCTAATGTCACCTTAGTCAGTGCGTTACAATTGGGAGGGCTCAATACTCTTGGGATATCGCTCGCAAGGATTGATTTTGCACCTCATGGTGGCCTTAATCCTCCTCACATACACCCTCGAGCGACAGAGGTAATTGTTGTCCTTGAAGGAGAGTTGTATGTCGGTTTTGTCACCTCCAACCTAGCAGAAGGCGGAAACAAGCTCTTTGCTAAGGTTCTTAAGCCGGGAGACGTTTTCGTATTCCCTCAAGGGCTCATTCACTTCCAATTCAACGTTGGAGAATACCCAGCCGCCCTTATTGCTGGACTGAGCAGCCAGAACCCTGGTGTAAGTACCATTGCTAATGCGGTGTTCGGAGCAAAGCCACCTATCTCTGTTGATGTACTCAGCAAAGCCTTCCAACTTGATCCCAAAATAGTCAAGTTTCTTCAGTCCCGCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50918.p2 GENE.R_Transcript_50918~~R_Transcript_50918.p2 ORF type:3prime_partial len:208 (+),score=20.38,Cupin_1|PF00190.18|4.8e-47,Cupin_2|PF07883.7|4.4e-10 R_Transcript_50918:1929-2549(+)
MGYVLDQKWKNIWVSTEEKRSKRNSVFVNGLFCKNPMEATPEDFFFEGLDKPGDTHNPVGSNVTLVSALQLGGLNTLGISLARIDFAPHGGLNPPHIHPRATEVIVVLEGELYVGFVTSNLAEGGNKLFAKVLKPGDVFVFPQGLIHFQFNVGEYPAALIAGLSSQNPGVSTIANAVFGAKPPISVDVLSKAFQLDPKIVKFLQSRF

Click here to download the sequence:
Link to NCBI Protein BLAST