Transcript Information: R_Transcript_50925.p1


Annotated TAIR IDAT5G35910.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H fold protein with HRDC domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:14029871-14035405 | Reverse length=870
E-Value8.3E-304
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.282257857352
Replicate 215.314426307871
Replicate 316.998445869449
Condition 2: 8 Hour
Replicate 120.37037601848
Replicate 224.322777393848
Replicate 327.304166926861
Condition 3: 24 Hour
Replicate 124.60805129904
Replicate 219.350808540358
Replicate 324.155141324652


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50925.p1 GENE.R_Transcript_50925~~R_Transcript_50925.p1 ORF type:complete len:946 (+),score=218.49,DNA_pol_A_exo1|PF01612.16|1.7e-45,HRDC|PF00570.19|2.6e-13,PMC2NT|PF08066.8|5.4e-12 R_Transcript_50925:183-3020(+)
ATGGAGATCGATCCTTCGCAGTCGGAGGCTCTTCGGCAAAAATCAGACACTCTAAGAGCCCTATCGACGGGCTCAATTCCTTCGTCAATTTCAAAACTCTCTAGTTCATCTAGGGCTTTACCTTCCGAGAAGGACTTCCATTTCTACTACAACTTCGACGAGTTCCGAGCTCCAATCGACGAAATTGGGGCCAAGTCCCATTCTATGTTACAGAAAATTGGCTCTTCGAGGCATTTGTTTTCCGGAAAAGAGATGAGTTTTCCTCAAGGTGATGTTGATGATGATGACGCCTGTGATTGGCTTGTGAATGTAAATGATGACGTCATTGAGCGGTTTGATTACTCGATTGATGAGTTTTCGAGGTTAAGGAAGGAACAAGAAGAAGGAGCTAAGGTTCGGGCTGGGGGTTTGGTTGATCAGAATGGGTTTCAGTTGGTTTTGGGGAAGAAGAAGAGGTTTGTTATTCCGCCCGGTGCGGTCGCAGGGACGAGAGAGAAAGAGGATTCAACAACGCCTGTGGTGGTGAAGGTGGCGGAGAGGGATAAGAAGACGGTGGGGCCGAAGCCTAAGATTCCGTTCCATATTCCGACGATTAAGAGGCCACAGGAGGAATTTAATATCCTGGTTAATAATGCTAATCAGCCTTTCCAGCATGTTTGGCTCGAGAGGAGTGAGGATGGGTCCAGGTTCATTCATCCATTGGAGAAATTGTCGGCTGTGGATTTTGTGGATCAAAACGTTGAGAGTCTTGAACCAGTGGAGCCACTGCCATATGAATCTACTCCATTCAAGGTGGTGGAAGAAGTCAAAGATCTGAAGGATTTAGCCGCTAAACTGCGCAGTGTGAATGAATTTGCAGTCGACTTGGAGCACAATCAGTATCGATCCTTCCAAGGGTTGACTTGCTTGATGCAAATTTCTACCAGAACTGAAGACTTTGTTGTTGATACTTTGAAACTTAGAATTCATATTGGCCCTTATCTGAGGGAAGTTTTCAAGGATCATACTAAAAAAAAGGTCATGCATGGAGCTGACAGGGATATTGCTTGGCTTCAGAGGGACTTTGGCATATATGTGTGCAATTTATTTGATACGGGACAGGCATCAAGAGTGTTGCAAATGGAGCGACATAGCCTGGAATATCTTCTCCAACATTTTTGTGGAGTTACAGCAAACAAAGAATATCAGAATGCAGATTGGAGGTTGCGTCCCCTCCCTGAAGAGATGATAAGATATGCCCGAGAAGACACCCACTATCTGTTATATATATATGATTTAATGAGGATCAGGCTTTCAGAGACTTTGAATTCTGAATACCCTGATGGGCTTTTGCTGGAGGTTTACAAGCGGAGTTATGATTTATGTATGCAACTTTATGAAAAGGAGTTGTTAACAGATACTTCATATCTTTACATATACGGGGTGCAGGGGGCTAATCTAAATGCTCAGCAGCTTTCCATTGTTGCCGGTCTAAGTGAATGGAGAGATATGATTGCCCGTGCAGAGGATGAAAGCACCGGTTATATACTGCCAAATAAGACACTCTTGGAAATAGCCAAGCAGATGCCCCTCACTACTAGTAAGTTGCGACGATTGGTGAAGTCTAAGCACCCTTATGTGGAGCGCAATCTCAGTGCTGTGGTCACCATCATCAGGCATGCCGTTCAGAATGCTTCATCATTTGAAGCAGTGGCTGAGCAATTGAAAGATGGTCGCATTCAGGCACCTGAATCAAGTTCTGCAGGCATTGACTTTCCGGAGGTTTATACTGCTGGCGAGCAGAGTGGAGAAGGTTTTGATGTTGACCAGAATGAACATGTATCAGATCCTTTGCCGTCAAATGAAGGAACTTGCAAGCTTAGCAAATATAGAGATGGAGTTTCTTTTGGGGAATTCAGTCGGAATGCGAATATGGGGAAAAATACTAAAGAAAGCCTTGCATCCTCTAGTCAGAAGGGTGACATAAATGTTGAAGCAACTGTCCAGGTGCTGAGGAAGCCAAATCGTGCTTTTGGGGCATTGCTGGGTAGTTCCTCATCAAGAAAGAAACCTGATTTCATAAAGGACAAGGGAGACAACAAATTGGAGCAGATCAAGTCGTCAGTGAATCTGCCATTTTTCTCCTTTTTGCAAAGGAATCAGCAGTCAAATTTGCCATCTAAGCAAACGCCTCAAGAGCCAAACAGAGTTCTGGAGACACAGCTTTCTGCAGAGTGTTCTGCTGAACCAGCTACGAGCTTAGATTCAGAGGATATAATATTATTAGATGGTGATAGACAGTCGAATCAAGCGCCTGAAGAGCCAGTCCCTGAAAATCAACCATCTTCAAGCAGTAAATTGGACGATATTATACTGCTGGACAGTGATTCTGATGATGAAGCGCCACGAGCTGATGAGTCAGCTGGTACTGAAAATCAGGCAAACACAAAAGATAATCAAGAAACTTCCACACCCGAGCTGGTAGTTCTGGATGAGGATGATGACGTTGAAGAAGATGAGAATGATAATGGTGAGCCAATGTCCCTTTCCGATTTGTCTTCTAATTTCCAGAAATGCCTGCAGTCTTCAAATGAGAAAGAAGCAGCCAAACAAGATGGCAAGTCTAAAGAAACTGGTTTCCTACAGTTTAAACCTTTCGATTATGAGGCTGCAAGGAAAGAGTTGAGATTTGGGGAAGATGCAGGGAGAGGCGCAAGGACAGGTGATAATAGTGGTGGTGGAAAGAATATGGGAAAGAAGAAAGGCGATAAGAGCAAGCAAGAGGAAGCTGGACTTCCCCAAGGTAGAAGACGTCAAGCTTTCCCGGCTAGTGGGAATCGTAGTGCTACTTTTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50925.p1 GENE.R_Transcript_50925~~R_Transcript_50925.p1 ORF type:complete len:946 (+),score=218.49,DNA_pol_A_exo1|PF01612.16|1.7e-45,HRDC|PF00570.19|2.6e-13,PMC2NT|PF08066.8|5.4e-12 R_Transcript_50925:183-3020(+)
MEIDPSQSEALRQKSDTLRALSTGSIPSSISKLSSSSRALPSEKDFHFYYNFDEFRAPIDEIGAKSHSMLQKIGSSRHLFSGKEMSFPQGDVDDDDACDWLVNVNDDVIERFDYSIDEFSRLRKEQEEGAKVRAGGLVDQNGFQLVLGKKKRFVIPPGAVAGTREKEDSTTPVVVKVAERDKKTVGPKPKIPFHIPTIKRPQEEFNILVNNANQPFQHVWLERSEDGSRFIHPLEKLSAVDFVDQNVESLEPVEPLPYESTPFKVVEEVKDLKDLAAKLRSVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHIGPYLREVFKDHTKKKVMHGADRDIAWLQRDFGIYVCNLFDTGQASRVLQMERHSLEYLLQHFCGVTANKEYQNADWRLRPLPEEMIRYAREDTHYLLYIYDLMRIRLSETLNSEYPDGLLLEVYKRSYDLCMQLYEKELLTDTSYLYIYGVQGANLNAQQLSIVAGLSEWRDMIARAEDESTGYILPNKTLLEIAKQMPLTTSKLRRLVKSKHPYVERNLSAVVTIIRHAVQNASSFEAVAEQLKDGRIQAPESSSAGIDFPEVYTAGEQSGEGFDVDQNEHVSDPLPSNEGTCKLSKYRDGVSFGEFSRNANMGKNTKESLASSSQKGDINVEATVQVLRKPNRAFGALLGSSSSRKKPDFIKDKGDNKLEQIKSSVNLPFFSFLQRNQQSNLPSKQTPQEPNRVLETQLSAECSAEPATSLDSEDIILLDGDRQSNQAPEEPVPENQPSSSSKLDDIILLDSDSDDEAPRADESAGTENQANTKDNQETSTPELVVLDEDDDVEEDENDNGEPMSLSDLSSNFQKCLQSSNEKEAAKQDGKSKETGFLQFKPFDYEAARKELRFGEDAGRGARTGDNSGGGKNMGKKKGDKSKQEEAGLPQGRRRQAFPASGNRSATFR*

Click here to download the sequence:
Link to NCBI Protein BLAST