Transcript Information: R_Transcript_50937.p1


Annotated TAIR IDAT1G55265.1
Annotated Gene NameProtein of unknown function, DUF538
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20617326-20617853 | Forward length=175
E-Value2.7E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 186.781621381207
Replicate 273.794014913422
Replicate 385.464904013715
Condition 2: 8 Hour
Replicate 155.558570757492
Replicate 267.998003259746
Replicate 369.315799620542
Condition 3: 24 Hour
Replicate 165.38276093504
Replicate 263.457236106222
Replicate 369.375063978353


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50937.p1 GENE.R_Transcript_50937~~R_Transcript_50937.p1 ORF type:complete len:171 (+),score=36.27,DUF538|PF04398.8|1.5e-29 R_Transcript_50937:172-684(+)
ATGGCAGTCTCTCACTCAATCTCCATCTTCTTGATTTCTCTCCTCTCTCTTGCCTCCCTCAGCATTTCCAATCCCATCCATCCATCATCCAACGGTCCTGAAGATATCCACGACATCCTGCCAACCTACAACATCCCAAAGGGCATCTTGCCTAATGCTGTCAAGTCCTATACTCTCACACAAGATGGCACTTTTGTTGTTCAAATGGAGCGCCCTTGTTATGTAAAATTCCAGGATGATCAGATTGTGTATTATGATAAGGTCATCAAGGGCAAGCTCAGCTATGGTGCAGTGTCCCAAGTTTCTGGGATTCAAGCCAAGAAGCTCTTCTTTTGGGTATCTGTTACTGGTCTTTACATTGATTCTGATTCAGGCATGGTTGAATTCCATGTTGGAGCTCTGACCCAGAAACTTCCTGCTCAACAATTTGAGACTATACCCACTTGTCTTAACAAGGCTTGTTCCTCTGATCTTAAGTTTAAGTCCTGTTGGCTCAATTACTACTCTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50937.p1 GENE.R_Transcript_50937~~R_Transcript_50937.p1 ORF type:complete len:171 (+),score=36.27,DUF538|PF04398.8|1.5e-29 R_Transcript_50937:172-684(+)
MAVSHSISIFLISLLSLASLSISNPIHPSSNGPEDIHDILPTYNIPKGILPNAVKSYTLTQDGTFVVQMERPCYVKFQDDQIVYYDKVIKGKLSYGAVSQVSGIQAKKLFFWVSVTGLYIDSDSGMVEFHVGALTQKLPAQQFETIPTCLNKACSSDLKFKSCWLNYYSS*

Click here to download the sequence:
Link to NCBI Protein BLAST