Transcript Information: R_Transcript_50964.p1


Annotated TAIR IDAT1G09060.3
Annotated Gene NameZinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2921235-2925254 | Reverse length=944
E-Value1E-162
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.925512870207
Replicate 213.408852290782
Replicate 316.37724697295
Condition 2: 8 Hour
Replicate 116.705309730363
Replicate 219.40032894944
Replicate 322.166452844834
Condition 3: 24 Hour
Replicate 120.31158022638
Replicate 217.761010664219
Replicate 323.387796596903


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50964.p1 GENE.R_Transcript_50964~~R_Transcript_50964.p1 ORF type:complete len:642 (+),score=129.75,JmjC|PF02373.18|1.6e-07 R_Transcript_50964:1864-3789(+)
ATGCATGTTTTACTGAAAGAGCTGTGCATCAGTGATTGCTGCAGAGTACCTATTGTTGACTACCACCGGCATTGTTCAAGCTGCTCGTATGATCTCTGCCTTAGTTGCTGTCAGGATCTTCGTAATTCATCGTTGAGTGGTGCAGAAGATAATGTGGGGGATGATCACACTTCAGAAAAAGGTCTGTTAAAAGAATCTCTGAAGAAGCTTCAGGGTTCATCAAATCATAGGCTTCCTTTGAGCATGAAGTTTCCTGGCTGGAAAGCCAATAAAGATGGCAGTGTACCATGCCGTCCAAGGGATCATGGCGGCTGTGGTTGCCCTTATCTGACTCTTCAGCGGATATTTAAGATGAATTGGGTTGCCAAACTGGTAAAAAATTTGGAGGAAATGGTAAGTGGTTGCAAGGTTAACGCCTCCAGTTCATCCCCAGAGACCGGCTCACTTAAGTCTAGGTTTCTTGAGTGTGCATACCGTAAGGACAGTGATGACAACTTGTTGTATTGTCCATCAGCTCAAGAAATCAAAGGGGATGAGGTAGATTACTTCAGAAAGCATTGGGCGAAGGGTGAACCTGTCATTGTCAAGCAGGTCTCTGATTTTTCATCAAGCTTAAGTTGGGACCCCATGGTTATATGGAGAGAAATTTGTGAAACGATAGATGAGAGGAAGAAAGATGCTGACAGAATGATGAAAGCTGTTGATTGTTTGGATTGGTCTGAGGTCGATATAGAACTTGTCCAGTTCATGAAAGGGTACTCAGAGGGACGCATCCATGAAAATGGTTGGCCACAAATGTTGAAGCTGAAGGATTGGCCATCTCCAAGTGCTGCTGAAGAGTTCCTCTTGTACCAAAGACCTGACTTTATCAGTAAAGTCCCTTTTCTTGAATTTATTCATTTGAAGTGGGGGCTTCTGAACGTTGCTGCTAAATTGCCCCATTATTCCTTGCAAAATGATGTAGGCCCTAAGATTTTTATCTCTTATGGCCTATGTGAAGAGTTAGGTAGAGGTGACTCAGTGAGCAAGCTCCATTTGAACATGCGAGATATGGTATATCTATTGGTACATTCTTGTGACGTGAAACTCAAAGGCTGGCAGCGGGCAAATATTGAGAAGATACAAAAAGCTTCTGGCGAACCTGAGGTGCAACCGTTATCTGGAGATCCACACAGAGGCGTAAATGAGCAAAACTCACTTGTTTCTCCCATTGATAGAAATGATAGAGGAGAGGTGTATAAACTAGATATAAATCTAGATGAGCAAATAGAGGAGGCTGAATGCCGAAATATTGACCTTGAACGTGAGAACACCGAGAAAGATGTTCATTCTTGTGATAATCGTCCAGGGGCTGTTTGGGATGTTTTTCGAAGAGAGGATATTCCAAAGTTAGCTGAGTATCTAAGAGCACATTGGAATGAGTTCGGAAATTCAGATGCTGTCCTTACTAGTCCTGCTACACACCTTCTTTATGATGACGCAGTGTATCTCTATGAACACCATAAAAAGAGGCTGAAGGAAGAATTTGGGGTTGAGCCATGGTCATTTGAGCAATACTTGGGCCAAGCAGTTTTTGTCCCTGCTGGATGTCCATTCCAAGTTAGAAATCTCCAGTCAACTGTGCAATTAGGCCTTGATTTCTTGTCTTCCGAGAGCTTAGAGCAGGCAGTAAAATTGGCTGAGGAGATACGTTGTCTTCCAAATGATCATGCTGCAAAGCTTCAAATGGTGGAGGTTGGGAAGATATCACTCTATGCAGCTAGTTCGGCAATTAAAGAAGTTCAGAAATTGGTGCTAGATGAAAAGCTTGGTGCTGAGCTTGCGTTTGAGGACCGTAATCTGACTGCAATGGTCTCGGAGAACCTCGAGAGAATTATAAAACAAAGCAACTATACCCTCCTATCGGATAAAGTACATCCAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50964.p1 GENE.R_Transcript_50964~~R_Transcript_50964.p1 ORF type:complete len:642 (+),score=129.75,JmjC|PF02373.18|1.6e-07 R_Transcript_50964:1864-3789(+)
MHVLLKELCISDCCRVPIVDYHRHCSSCSYDLCLSCCQDLRNSSLSGAEDNVGDDHTSEKGLLKESLKKLQGSSNHRLPLSMKFPGWKANKDGSVPCRPRDHGGCGCPYLTLQRIFKMNWVAKLVKNLEEMVSGCKVNASSSSPETGSLKSRFLECAYRKDSDDNLLYCPSAQEIKGDEVDYFRKHWAKGEPVIVKQVSDFSSSLSWDPMVIWREICETIDERKKDADRMMKAVDCLDWSEVDIELVQFMKGYSEGRIHENGWPQMLKLKDWPSPSAAEEFLLYQRPDFISKVPFLEFIHLKWGLLNVAAKLPHYSLQNDVGPKIFISYGLCEELGRGDSVSKLHLNMRDMVYLLVHSCDVKLKGWQRANIEKIQKASGEPEVQPLSGDPHRGVNEQNSLVSPIDRNDRGEVYKLDINLDEQIEEAECRNIDLERENTEKDVHSCDNRPGAVWDVFRREDIPKLAEYLRAHWNEFGNSDAVLTSPATHLLYDDAVYLYEHHKKRLKEEFGVEPWSFEQYLGQAVFVPAGCPFQVRNLQSTVQLGLDFLSSESLEQAVKLAEEIRCLPNDHAAKLQMVEVGKISLYAASSAIKEVQKLVLDEKLGAELAFEDRNLTAMVSENLERIIKQSNYTLLSDKVHPV*

Click here to download the sequence:
Link to NCBI Protein BLAST