Transcript Information: R_Transcript_50965.p1


Annotated TAIR IDAT1G09060.3
Annotated Gene NameZinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2921235-2925254 | Reverse length=944
E-Value5.7E-251
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3787229142834
Replicate 22.906745890966
Replicate 34.3719848637818
Condition 2: 8 Hour
Replicate 15.1999551904096
Replicate 26.1913194345218
Replicate 39.1977919407068
Condition 3: 24 Hour
Replicate 19.31889486931
Replicate 24.8616430887832
Replicate 38.7080115420989


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_50965.p1 GENE.R_Transcript_50965~~R_Transcript_50965.p1 ORF type:3prime_partial len:744 (+),score=136.30,WRC|PF08879.6|3.8e-14,WRC|PF08879.6|3.3e+03,zf-4CXXC_R1|PF10497.5|9.1e+03,zf-4CXXC_R1|PF10497.5|4.8e-08,zf-4CXXC_R1|PF10497.5|1.7e+03 R_Transcript_50965:236-2464(+)
ATGGACAATCCTCGTTCATCTGTGGCGAACGGGGATGATAATGTCGGAATCCCGGATGATTTGCGGTGTAAGAGGTCTGATGGTAAGCAATGGAGATGTACAGCAATGTCAATGCCAGACAAAACTGTGTGTGAGAAGCATTACATTCAGGCAAAAAAGAGGGCGGCAAACTCCGCTTTACGAGCTAGTATGAAGAAAGCCAAGAGGAAGTCTGTAGGTGATGAAAGCCAGGTTTGTTTGGAGATTAAGAGTGAAGACAAGGATGCGGCACTTATGGATTTAGATTTGCAGGATTATCCGGTCTTAGGTTCAGGGAACATGTCTAAGGATAGGTTAATGAAGGGTCAAGTTCGGTATTCTCCGGAGTCGTCACCACTGAAAAGCATGTCTGTCCGTAATTCGTTGGATCTGGAGGATGATGTGCAAATGGACGGTTCCCCCTTTGATGATGGCCAGCAGTCCTATAGGGCATCGCCTGCTTACGGTATTGAGTCTTCGAGGAACATGTTACATAAAGGCATTGAAAATGGCAATATGGCCACAAGTGAGGATCACTTCGATCCAAGCACAGATTCTTCTGATGACACGGGTGGACTAACATGCCATCAATGCCGACGGAGTGACAAAGGCTCAGTTATTTGGTGCCTAAAATGTGATAGGAGAGGGTATTGTGGTAGCTGCATCAGTACATGGTATACAAACCTTCCGTTGGAAGAGATCCAAAGAGTTTGCCCTGCATGTCGTGGCTGTTGTAATTGCAAGGTCTGCTCTAGGGGAGATAATTTGATAAAGGCAAGAATACGAGAGATACCTGTGCTGGATAAGTTGCGATATCTTTATTGTTTGTTATCTTCGGTGCTTCCCGTAGTTAGGCAGATCCACCAGCAGCAGTGTGCTGAAGTGGAGTTGGAGAAGCAGCTTCGTGGAGTTGAAGTCGACCTTGAGAGAATGAAACTGAATGCAGATGAGCAAATGTGCTGTGATTGCTGCAGAGTACCTATTGTTGACTACCACCGGCATTGTTCAAGCTGCTCGTATGATCTCTGCCTTAGTTGCTGTCAGGATCTTCGTAATTCATCGTTGAGTGGTGCAGAAGATAATGTGGGGGATGATCACACTTCAGAAAAAGGTCTGTTAAAAGAATCTCTGAAGAAGCTTCAGGGTTCATCAAATCATAGGCTTCCTTTGAGCATGAAGTTTCCTGGCTGGAAAGCCAATAAAGATGGCAGTGTACCATGCCGTCCAAGGGATCATGGCGGCTGTGGTTGCCCTTATCTGACTCTTCAGCGGATATTTAAGATGAATTGGGTTGCCAAACTGGTAAAAAATTTGGAGGAAATGGTAAGTGGTTGCAAGGTTAACGCCTCCAGTTCATCCCCAGAGACCGGCTCACTTAAGTCTAGGTTTCTTGAGTGTGCATACCGTAAGGACAGTGATGACAACTTGTTGTATTGTCCATCAGCTCAAGAAATCAAAGGGGATGAGGTAGATTACTTCAGAAAGCATTGGGCGAAGGGTGAACCTGTCATTGTCAAGCAGGTCTCTGATTTTTCATCAAGCTTAAGTTGGGACCCCATGGTTATATGGAGAGAAATTTGTGAAACGATAGATGAGAGGAAGAAAGATGCTGACAGAATGATGAAAGCTGTTGATTGTTTGGATTGGTCTGAGGTCGATATAGAACTTGTCCAGTTCATGAAAGGGTACTCAGAGGGACGCATCCATGAAAATGGTTGGCCACAAATGTTGAAGCTGAAGGATTGGCCATCTCCAAGTGCTGCTGAAGAGTTCCTCTTGTACCAAAGACCTGACTTTATCAGTAAAGTCCCTTTTCTTGAATTTATTCATTTGAAGTGGGGGCTTCTGAACGTTGCTGCTAAATTGCCCCATTATTCCTTGCAAAATGATGTAGGCCCTAAGATTTTTATCTCTTATGGCCTATGTGAAGAGTTAGGTAGAGGTGACTCAGTGAGCAAGCTCCATTTGAACATGCGAGATATGGTATATCTATTGGTACATTCTTGTGACGTGAAACTCAAAGGCTGGCAGCGGGCAAATATTGAGAAGATACAAAAAGCTTCTGGCGAACCTGAGGTGCAACCGTTATCTGGAGATCCACACAGAGGCGTAAATGAGCAAAACTCACTTGTTTCTCCCATTGATAGAAATGATAGAGGAGAGGTGTATAAACTAGATATAAATCTAGATGAGCAAATAGAGGAGGCTGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_50965.p1 GENE.R_Transcript_50965~~R_Transcript_50965.p1 ORF type:3prime_partial len:744 (+),score=136.30,WRC|PF08879.6|3.8e-14,WRC|PF08879.6|3.3e+03,zf-4CXXC_R1|PF10497.5|9.1e+03,zf-4CXXC_R1|PF10497.5|4.8e-08,zf-4CXXC_R1|PF10497.5|1.7e+03 R_Transcript_50965:236-2464(+)
MDNPRSSVANGDDNVGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSALRASMKKAKRKSVGDESQVCLEIKSEDKDAALMDLDLQDYPVLGSGNMSKDRLMKGQVRYSPESSPLKSMSVRNSLDLEDDVQMDGSPFDDGQQSYRASPAYGIESSRNMLHKGIENGNMATSEDHFDPSTDSSDDTGGLTCHQCRRSDKGSVIWCLKCDRRGYCGSCISTWYTNLPLEEIQRVCPACRGCCNCKVCSRGDNLIKARIREIPVLDKLRYLYCLLSSVLPVVRQIHQQQCAEVELEKQLRGVEVDLERMKLNADEQMCCDCCRVPIVDYHRHCSSCSYDLCLSCCQDLRNSSLSGAEDNVGDDHTSEKGLLKESLKKLQGSSNHRLPLSMKFPGWKANKDGSVPCRPRDHGGCGCPYLTLQRIFKMNWVAKLVKNLEEMVSGCKVNASSSSPETGSLKSRFLECAYRKDSDDNLLYCPSAQEIKGDEVDYFRKHWAKGEPVIVKQVSDFSSSLSWDPMVIWREICETIDERKKDADRMMKAVDCLDWSEVDIELVQFMKGYSEGRIHENGWPQMLKLKDWPSPSAAEEFLLYQRPDFISKVPFLEFIHLKWGLLNVAAKLPHYSLQNDVGPKIFISYGLCEELGRGDSVSKLHLNMRDMVYLLVHSCDVKLKGWQRANIEKIQKASGEPEVQPLSGDPHRGVNEQNSLVSPIDRNDRGEVYKLDINLDEQIEEAE

Click here to download the sequence:
Link to NCBI Protein BLAST