Transcript Information: R_Transcript_51011.p1


Annotated TAIR IDAT1G56500.1
Annotated Gene Namehaloacid dehalogenase-like hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21159775-21167092 | Forward length=1055
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1069162148117
Replicate 22.4787299102574
Replicate 32.926972026175
Condition 2: 8 Hour
Replicate 13.5028390132865
Replicate 23.9442111025425
Replicate 33.3025847100982
Condition 3: 24 Hour
Replicate 13.6987578311301
Replicate 23.0632304014691
Replicate 33.3439548827204


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51011.p1 GENE.R_Transcript_51011~~R_Transcript_51011.p1 ORF type:complete len:720 (+),score=164.90,NHL|PF01436.17|3.5e+03,NHL|PF01436.17|6.6e+03,NHL|PF01436.17|0.61,NHL|PF01436.17|6.3e-06,NHL|PF01436.17|0.01,NHL|PF01436.17|0.0088,NHL|PF01436.17|4.9e-05,NHL|PF01436.17|5.1,Thioredoxin_8|PF13905.2|2e-12,SGL|PF08450.8|1.1e-06,SGL|PF08450.8|8.4,Redoxin|PF08534.6|3.4e-07,AhpC-TSA|PF00578.17|6.6e-07 R_Transcript_51011:807-2966(+)
ATGCAAGTTGTTATGATCTTGCAGGCAATGCAATATGCATCTCCAAAAGCACTTTGGAATCTTTTATTTGGAGTGAATGGTCCAAGTATTGAACCAAATGAAGGTCAGTCACGGTCTGGCAGGGTTGAACAGCTTGTTAATTACATATCTGACCTAGAAAGCAGGGGAAATGCTCTTACAGTGCCTGAATTCCCATCAAAGCTTGATTGGCTAAACACTGCCCCACTTCAGTTTCGCAGGGATCTGAAAGGAAAAGTGGTTGTGCTGGATTTCTGGACTTACTGCTGCATTAACTGTATGCATGTTCTGCCTGATCTTGAGTTCTTGGAGAAGAAGTACAAGGATATGCCGTTCACTGTCATTGGAGTACATTCTGCTAAATTTGACAATGAGAAAGACTTGGAAGCAATTCGCAACGCAGTCCTAAGATATGGAATTACTCATCCTGTAGTGAATGATGGGGACATGTATTTATGGCGTGAGCTAGGGGTTAATTCATGGCCGACATTTGTCATTGTTGGACCCAATGGTAGGCTTCTAGCACAATCAGCAGGAGAAGGTCGCCGAAAGGACCTTGATGACATTGTGGAGGCAGCTCTTATGTTTTATGGAGAAAGGAAGGTCTTAGATGGTACACCACTTCCTCTGCATCTGGAGAAAGATAATGACCCGCGATTGCTGATCTCTCCATTGAAGTTTCCCGGAAAGCTGGAAGTGGATCTCCTCAACAATAGGCTTTTCATTTCAGACAGCAACCACAACCGTATTGTTGTCACTGATCTGGATGGGAATTATATTACACAAATCGGGAGCTCAGGTGAGGAGGGTTTCCGTGATGGAAGTTTCGAAGATGCAACTTTTAATAGGCCTCAGGGCCTTGCTTACAATGCAAAAAGAAATGCGCTATATGTTGCAGATACTGAAAATCATGCTTTGAGAGAAATTGATTTTGTTAATGACACGGTTCGTACACTTGCTGGTAACGGAACAAAGGGTTCAGATTACAGAGGAGGGGGAAGAAAAACCACTCAGCCTCTCAATTCTCCATGGGATGTCTGTTTTGACCCTTCTAGTGAGAAAGTGTACATTGCAATGGCTGGGCAGCATCAGATCTGGGAGCACAATCTATCAGACGGGACTACCATCGCTTTTAGTGGTGATGGTTATGAAAGAAACTTGAATGGTTCAAGCCCTACCAGCACTTCATTTGCACAACCTTCCGGAATGTCAATATCCCCTGATATGAAGGATGTGTACATCGCTGATAGTGAGAGTAGCTCCATCCGAGCTCTTGATCTCAAGACTGGAGGATCAAGATTGCTAGCTGGTGGTGATCCTATTTTCCCTGACAATTTGTTCAAATTTGGAGATCATGACGGCATAGGTTCTGAAGTACTTCTTCAACATCCATTGGGTGTCTGTTTTGGACAAGATGGCCCATTATATATTGCAGATTCTTATAACCACAAGGTAAAGAAGCTTGATCTATCAAATAAACGAGTTACGACTTTAGCTGGGACTGGAAAAGCTGGTTTCAAGGATGGCAAAGCTCTTGCAGCTCAGCTCTCAGAGCCATCAGGACTTGTTGAAGTAGGCAAGGGAAAACTTCTCATAGCTGATACAAACAATAGTATAATCCGATACATGGACTTGAACCAGCAAGACCCTGATCTTCTTACATCGGAGTTGAAAGGTGTCCAGCCTCCTGCTCCAAAAGGCAAAACCATGAAAAGATTGAGGAGGCGATTATCAGCTGACACCCAGGTCATCAAGGTGGATGGTGGTCCATCAAAGGAGGGCAATTTGTACCTGAGAATATCACTACCTGAAGGATACCATTTCTCAAAGGAAGCACGGAGTAAATTCAACATAGAAACAGAGCCAGATAACACAGTCGCCATTGAGCCCTTGGATGGTGCTCTCAGTTCAGAAGGATCTGCCACACTTCATTTTAAGAGATACACTCCTTCAGCATTTATGGGAAGAATAAATTGCAAGGTCTATTATTGTAAAGAAGATGAAGTTTGTTTATACCAGTCACTAGCTTTTGAAGTACCGTTCACAGAAGTTCCGGACTTGCCCCCATCAGAAATTTATCTCCAGTATGTTGTGAAGCCCAGAGACACTAGAGGCAGCTTACAGCTACCAGCTGCACTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51011.p1 GENE.R_Transcript_51011~~R_Transcript_51011.p1 ORF type:complete len:720 (+),score=164.90,NHL|PF01436.17|3.5e+03,NHL|PF01436.17|6.6e+03,NHL|PF01436.17|0.61,NHL|PF01436.17|6.3e-06,NHL|PF01436.17|0.01,NHL|PF01436.17|0.0088,NHL|PF01436.17|4.9e-05,NHL|PF01436.17|5.1,Thioredoxin_8|PF13905.2|2e-12,SGL|PF08450.8|1.1e-06,SGL|PF08450.8|8.4,Redoxin|PF08534.6|3.4e-07,AhpC-TSA|PF00578.17|6.6e-07 R_Transcript_51011:807-2966(+)
MQVVMILQAMQYASPKALWNLLFGVNGPSIEPNEGQSRSGRVEQLVNYISDLESRGNALTVPEFPSKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVIGVHSAKFDNEKDLEAIRNAVLRYGITHPVVNDGDMYLWRELGVNSWPTFVIVGPNGRLLAQSAGEGRRKDLDDIVEAALMFYGERKVLDGTPLPLHLEKDNDPRLLISPLKFPGKLEVDLLNNRLFISDSNHNRIVVTDLDGNYITQIGSSGEEGFRDGSFEDATFNRPQGLAYNAKRNALYVADTENHALREIDFVNDTVRTLAGNGTKGSDYRGGGRKTTQPLNSPWDVCFDPSSEKVYIAMAGQHQIWEHNLSDGTTIAFSGDGYERNLNGSSPTSTSFAQPSGMSISPDMKDVYIADSESSSIRALDLKTGGSRLLAGGDPIFPDNLFKFGDHDGIGSEVLLQHPLGVCFGQDGPLYIADSYNHKVKKLDLSNKRVTTLAGTGKAGFKDGKALAAQLSEPSGLVEVGKGKLLIADTNNSIIRYMDLNQQDPDLLTSELKGVQPPAPKGKTMKRLRRRLSADTQVIKVDGGPSKEGNLYLRISLPEGYHFSKEARSKFNIETEPDNTVAIEPLDGALSSEGSATLHFKRYTPSAFMGRINCKVYYCKEDEVCLYQSLAFEVPFTEVPDLPPSEIYLQYVVKPRDTRGSLQLPAAL*

Click here to download the sequence:
Link to NCBI Protein BLAST