Transcript Information: R_Transcript_51161.p1


Annotated TAIR IDAT1G50420.1
Annotated Gene Namescarecrow-like 3
Annotated Gene Symbol(s)SCL3, SCL-3
Annotation TypeOrtholog
Chromosome Positionchr1:18678177-18679625 | Reverse length=482
E-Value1.4E-229
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.142389991108
Replicate 223.950325366643
Replicate 323.600881159672
Condition 2: 8 Hour
Replicate 117.860901487493
Replicate 230.492111601617
Replicate 333.120796002135
Condition 3: 24 Hour
Replicate 123.405037238633
Replicate 220.670837877965
Replicate 323.119480275337


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51161.p1 GENE.R_Transcript_51161~~R_Transcript_51161.p1 ORF type:complete len:462 (+),score=112.34,GRAS|PF03514.10|8.8e-142 R_Transcript_51161:910-2295(+)
ATGGGACCAATGCTTCAAGATGATGGATCATCAGTAACTTCATCACCTTTACAATTTTTCTCAATGATGTCACCCAATATGGGTTCATCATATCCTTGGCTTAGAGAGCTAAAACCTGAAGAAAGGGGTCTTTATTTAATACATTTGTTGCTCACTTGTGCAAATCATGTGTCTAATGGTAGTCTTGAGAATGCAAATTTAGCCCTTGAACAAATTTCCCACTTAGCTGCCCCAGATGGGGATACAATGCAAAGAATTGCTGCTTATTTTGCTGAAGGTCTTGGTGAAAGAATCCTTAAGTCATGGCCTGGTTTATATAAAGCCCTTCATTTCACTAGAATGTCTGTGGTTTCTGAGGAAATTCTTGCTAGGAAGCTCTTTCTTGAGCTGTTTCCCTTCTTGAAGCTGGCTTTTGTGGTGACAAACCAGTGTATAATCGAAGCAATGGAGGGCGAAAAGATGGTTCATATAATTGATATGAATGCTTCAGAACCTGCTCAATGGATAGCCCTTATTCAGGCCTTGAGTGCAAGGCCTGAGGGTCCACCTCATTTGAGAATTACTGGTGTTCATCAACAAAAGGAGGTTTTGGAACAAGTTGCTCATAGGTTGACTGAAGAAGCTGAGAAGTTGGATTTGCCATTTCAGTTCAATCCTGTAGTTTGTAAATTAGAGAATCTCGATATCGAGAAGCTTCGAGTTAAGACTGGGGAGGCTTTAGCTATCAGCTCAGTTCTTCAGTTGCATACCCTTTTGGCCTCAGATGATGAAACCTTAAGGAAAGGTTCTCCTCTAGGATTGATGAAGAATCCAAATGGAGGTCACTTACAGGGGTTTCTTAATAAAGATGGAGCTAATAGGCGAAGCCCGAGTAATGATTCAGCCTCATCATCACCTCCTTCTGTTAGTGTTTCAGCCAAGATGGATGGTTTCCTTAGTGCTTTGTGGGGTTTGTCACCAAAGATTATGGTTATAACTGAGCAAGAATCTAATCACAATGGTTCAGGACTTATCGAGAGATTGTCGGAAGCGTTGTATTTCTATGCAGCATTGTTTGATTGCTTAGAATCAAGCCTTCCCAGAGGATCCGTGGAGCGAAGGAAGGTGGAAAAGATGCTTCTTGGGGAAGAAATCAAGAACATTATAGCTTGTGAGGGAGGTGAAAGAAGAGAAAGGCACGAAAAGCTCGAGAAGTGGGTTCAAAGGCTTGATATGGCAGGGTTTGGTAGTGTTCCTTTGAGTTATATTGGTATGCTTCAAGCAAGGAGGCTGTTGCAAGGCTATGGTTGTGATGGTTATAGAGTGAAGGAAGAGAATGGATGTGTTGTTATATGTTGGCAAGATCGTCCGCTTTTTTCGGTATCAGCTTGGAGGTGTAGGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51161.p1 GENE.R_Transcript_51161~~R_Transcript_51161.p1 ORF type:complete len:462 (+),score=112.34,GRAS|PF03514.10|8.8e-142 R_Transcript_51161:910-2295(+)
MGPMLQDDGSSVTSSPLQFFSMMSPNMGSSYPWLRELKPEERGLYLIHLLLTCANHVSNGSLENANLALEQISHLAAPDGDTMQRIAAYFAEGLGERILKSWPGLYKALHFTRMSVVSEEILARKLFLELFPFLKLAFVVTNQCIIEAMEGEKMVHIIDMNASEPAQWIALIQALSARPEGPPHLRITGVHQQKEVLEQVAHRLTEEAEKLDLPFQFNPVVCKLENLDIEKLRVKTGEALAISSVLQLHTLLASDDETLRKGSPLGLMKNPNGGHLQGFLNKDGANRRSPSNDSASSSPPSVSVSAKMDGFLSALWGLSPKIMVITEQESNHNGSGLIERLSEALYFYAALFDCLESSLPRGSVERRKVEKMLLGEEIKNIIACEGGERRERHEKLEKWVQRLDMAGFGSVPLSYIGMLQARRLLQGYGCDGYRVKEENGCVVICWQDRPLFSVSAWRCRR*

Click here to download the sequence:
Link to NCBI Protein BLAST