Transcript Information: R_Transcript_51275.p1


Annotated TAIR IDAT5G47680.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA (guanine-N(1)-)-methyltransferase, metazoa (InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase, eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)TRM10, AtTRM
Annotation TypeOrtholog
Chromosome Positionchr5:19316329-19317467 | Reverse length=344
E-Value2.1E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.403397446104
Replicate 218.28523964826
Replicate 317.746428577239
Condition 2: 8 Hour
Replicate 111.973857034642
Replicate 211.549026885008
Replicate 313.663575027434
Condition 3: 24 Hour
Replicate 117.912135309527
Replicate 218.783324879338
Replicate 318.400103390634


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51275.p1 GENE.R_Transcript_51275~~R_Transcript_51275.p1 ORF type:complete len:364 (+),score=107.97,tRNA_m1G_MT|PF01746.17|6.3e-27 R_Transcript_51275:100-1191(+)
ATGGAAGAAACAGGCCAGAATCCACCACCACAACCATCCCCCAAAGCCACCGAACAAAACACCACCACCATCACCTTCCTCACAAACCCTCCAACAGAAACCCAACCCCCACTCTCAAAGAACGCACAGAAGAAGCTCTTAAAGCAACAAAGATACGAAGCCAAGAAAGCAGAGAAGAAAGCCTTAGCCAAAGAGCAAAAGCAGAAAGACAAAGAACGCAAACGCCAGGAATGGGAAGAGAAGCTCTCAAGCCTTGGCTCAGAAGAGGAGAAGCTCAAGTTGATAGAATCAAGAAGAGAGCTCAGAAAGGAGAGGATGGATAAAAGGTCCGAGGAAAGAGACAAGAAGATTGAGAGGCTTATGAAGGCTAAGATTGAGGGTCAGAATATTGTTATTGATCTTGAGTTTTCTCATCTTATGACCCCTCCTGAGCTCAATAGCCTTGTTCAGCAGATAATGTATTGCTATGCAGTTAATGGAAGGTGCACTTCCCCAGGCCATCTCTGGTTGACTGGTTGTGAAGGTAATATGGAAGACCACTTGAAGAGAATTCCTGGAATTGATAAATGGATCATTGAGAAAGAGAGTCGATCATACATTGAAGCATTGCAAGACCGGAAGGACAATTTGGTTTATCTGACCGCTGACGCAGAAACTGTTCTTGATGATCTTGATGCCAAGAAATTATATATCATTGGTGGCTTGGTGGATCGGAATCGATGGAAAGGAATAACTTTGAACAAAGCTCAAGACCAGGGTATCCAAGCAGCCAGACTCCCTATTGGCAATTACATGAAGATGTCAAGTTCTCAGGTCCTTACAGTGAACCAAGTGGTAGAGATACTGCTCAAGTACTTGGAGTTGAGGGATTGGAAGACTGCTTTCTTCCAAGTCATTCCTCAGAGGAAAAGAGGTGAAACAGGTTCAGAAGAAAATGGGACAGAATTAGAAGGCGAGGAAAACAAGGAAATGGATCATTTGTCTGGAGTCCAAAAGAAAATGAAAATGTCTGAAACAGAATCAGAGACAAGTGAAAGAGAAGTAGAAAATATCGAAACTGAGGACCCATCCAAACAGAGAGATGTAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51275.p1 GENE.R_Transcript_51275~~R_Transcript_51275.p1 ORF type:complete len:364 (+),score=107.97,tRNA_m1G_MT|PF01746.17|6.3e-27 R_Transcript_51275:100-1191(+)
MEETGQNPPPQPSPKATEQNTTTITFLTNPPTETQPPLSKNAQKKLLKQQRYEAKKAEKKALAKEQKQKDKERKRQEWEEKLSSLGSEEEKLKLIESRRELRKERMDKRSEERDKKIERLMKAKIEGQNIVIDLEFSHLMTPPELNSLVQQIMYCYAVNGRCTSPGHLWLTGCEGNMEDHLKRIPGIDKWIIEKESRSYIEALQDRKDNLVYLTADAETVLDDLDAKKLYIIGGLVDRNRWKGITLNKAQDQGIQAARLPIGNYMKMSSSQVLTVNQVVEILLKYLELRDWKTAFFQVIPQRKRGETGSEENGTELEGEENKEMDHLSGVQKKMKMSETESETSEREVENIETEDPSKQRDVN*

Click here to download the sequence:
Link to NCBI Protein BLAST