Transcript Information: R_Transcript_51289.p1


Annotated TAIR IDAT2G38330.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16064571-16067318 | Forward length=521
E-Value7.6E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6938212096023
Replicate 21.9233252289739
Replicate 32.5063351568309
Condition 2: 8 Hour
Replicate 12.367589994899
Replicate 22.2190188086673
Replicate 34.6649177421351
Condition 3: 24 Hour
Replicate 13.5050087370541
Replicate 22.5815315749785
Replicate 33.7871855437888


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51289.p1 GENE.R_Transcript_51289~~R_Transcript_51289.p1 ORF type:complete len:393 (+),score=79.11,MatE|PF01554.14|6.9e-09,MatE|PF01554.14|1.5e+03,MatE|PF01554.14|3.2e-14,MatE|PF01554.14|5.9e+03,Polysacc_synt_C|PF14667.2|1.9e+03,Polysacc_synt_C|PF14667.2|8.4e-09,Polysacc_synt_C|PF14667.2|1.2e+03,Polysacc_synt_C|PF14667.2|2.3e+02,Polysacc_synt_C|PF14667.2|11 R_Transcript_51289:794-1972(+)
ATGCAAAAGGAGAGCTCTATTCAAGCTAGCGAAGACAAGCACGAAAACAAGAAAGCCCTTCCTTCGGTTTCTACATCTTTAATTCTGGCAGCTGGTCTTGGACTGGCAGAAGCTGTGGCGCTGTCACTTGGATCTGGATTTCTAATGAATATTATGGGTATATCTGTTGATTCACCAATGCGAGAACCAGCTGAACAGTTCCTGAGGGCTTTTGGTGCTCCACCAATTGTCATTGCACTTGCTGCACAGGGAACCTTTCGGGGTTTTAAGGATACTAAGACACCTTTGTATGCAATTGGAGCTGGAAACTTATTGAATGCGGTTTTAGATCCAATCTTTATATTCTACTTTGGTTTGGGGATTGGTGGTGCAGCAATAGCAACTGTGATCTCTGAATACTGGATAGCCTTTATCCTGCTTTGGAAGTTGAATGGAGAAGTGTCCCTAACTGCTGCTCATATTGATGTTAAAAAATATCTTCAATATCTTAAATCAGGAGGTCTTTTGATTGGAAGGACCTTGTCAGTGCTTGTCCCTATGACATTAGCCACCTCTATGGCAGCAAGAGAAGGCCCTATACCTATGGCTGGTCATCAAATTTGTGTACAAGTTTGGTTGACAATATCATTGCTGACTGATGCTTTGGCTATTGCTGGGCAGGCCCTTCTTGTTGGCGACTATTCACAAGGAAATTATGACCAGGCACGACAATTTGTTTACAGGGTGTTGCAGATTGGTTTAGTGATGGGCATTGGTTTGGCTACCTTTCTGTTCCTTTGTTTTGGAGTGATCGCAAGCTCATTTACGTCAGATACAGATGTCCTCAAAATTGTTTGGTCTGGTGTCCTGTTTGTTGCTGGATCCCAGCCTGTAAATGCCATTGCTTTTGTTATTGATGGGGTCTACTATGGGGTTTCAGACTATGAATATGCTGCCTACTCCATGGTTGTAGCAGCTTGCATTTCATCCATTTTTCTGCTGTTTGCTGCTCCGATTTTTGGTCTTGCTGGGGTCTGGACAGGGTTGTTTCTGTTCATGAGTTTGCGTGTAATAGCTGGATGTTGGAGGTGGAATTTCTTCACTTTAAAGATAGATAACAGATTCTTTATGCAACATTCATCAATTACGAAGCTTGTCAAAAGATGTATTGGTATCATCATTATGCTTATTGAAGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51289.p1 GENE.R_Transcript_51289~~R_Transcript_51289.p1 ORF type:complete len:393 (+),score=79.11,MatE|PF01554.14|6.9e-09,MatE|PF01554.14|1.5e+03,MatE|PF01554.14|3.2e-14,MatE|PF01554.14|5.9e+03,Polysacc_synt_C|PF14667.2|1.9e+03,Polysacc_synt_C|PF14667.2|8.4e-09,Polysacc_synt_C|PF14667.2|1.2e+03,Polysacc_synt_C|PF14667.2|2.3e+02,Polysacc_synt_C|PF14667.2|11 R_Transcript_51289:794-1972(+)
MQKESSIQASEDKHENKKALPSVSTSLILAAGLGLAEAVALSLGSGFLMNIMGISVDSPMREPAEQFLRAFGAPPIVIALAAQGTFRGFKDTKTPLYAIGAGNLLNAVLDPIFIFYFGLGIGGAAIATVISEYWIAFILLWKLNGEVSLTAAHIDVKKYLQYLKSGGLLIGRTLSVLVPMTLATSMAAREGPIPMAGHQICVQVWLTISLLTDALAIAGQALLVGDYSQGNYDQARQFVYRVLQIGLVMGIGLATFLFLCFGVIASSFTSDTDVLKIVWSGVLFVAGSQPVNAIAFVIDGVYYGVSDYEYAAYSMVVAACISSIFLLFAAPIFGLAGVWTGLFLFMSLRVIAGCWRWNFFTLKIDNRFFMQHSSITKLVKRCIGIIIMLIEG*

Click here to download the sequence:
Link to NCBI Protein BLAST