Transcript Information: R_Transcript_51303.p1


Annotated TAIR IDAT4G34430.4
Annotated Gene NameDNA-binding family protein
Annotated Gene Symbol(s)CHB3, ATSWI3D
Annotation TypeOrtholog
Chromosome Positionchr4:16461069-16464993 | Forward length=986
E-Value3.2E-241
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.185868283314
Replicate 25.9070371644738
Replicate 37.848269427094
Condition 2: 8 Hour
Replicate 17.8209262227041
Replicate 27.3705785084688
Replicate 39.4550172312322
Condition 3: 24 Hour
Replicate 111.020600126948
Replicate 27.7408429532388
Replicate 39.9581943329431


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51303.p1 GENE.R_Transcript_51303~~R_Transcript_51303.p1 ORF type:complete len:1077 (+),score=315.37,SWIRM-assoc_1|PF16495.1|4.9e+03,SWIRM-assoc_1|PF16495.1|1.4e-24,SWIRM|PF04433.13|3.7e-20,Myb_DNA-binding|PF00249.27|1.5e-11,ZZ|PF00569.13|3.1e-08,Myb_DNA-bind_6|PF13921.2|2.9e-06 R_Transcript_51303:158-3388(+)
ATGGAGGACAAACGACGAGAAGCCGGATCGAACTCACCGGCACCGACAATATCCGCCACAACAACAACCCTAAAATCCGGCGAATCTCATTCTCCGTCAACAGAACCACCAGCTCCGAGACGGCGAGGCCAAAAGCGCAAATCCTCGCTCACCGGAACCTCATCGTCGGCGCCGCCGAAACGGCACGCTCGTGAGAAGGCCGCCGCCGCCGCCGCAGTCGCCGCCGCCGGTGGAATGTCGTCGTTTCTAGCGCCGATCCACAAAGGACCTCTAACTCGAGCTCGCCAGTTGTCGGATAACCACGCCATTTCATCGGCGATCAATGCGGCTCTTAAGAACGAGAAGAATTCATCAATGGTGGCTCAAGATGAGGCGAGAGAAGAGGTGAATTTGGCTAAACAAAAGTACGAGGCCCTTGAGGCTGTTATTGAGGCTGAGTTCGAGAGGATTCGATCTCGTGATACTGATGCTCATGTCGTTCCTGTTACCGCTGGTTGGTTTTCTTGGACTAATATCAATCCACTTGAGAAGCAATCCCTGCCATCTTTCTTCAATGGGAAATCTGAAAGTCGGACACCAGAAATTTACTTGGAGATAAGGAATTGGATTATGAAGAAGTTTCATGCCAATCCAAGTATGAATATTGAATTAAAAGATTTGTCGGCATTGTCTGTTGGAGATTCAGATGCGAAGCAAGAGGTCATGGAGTTTCTGGATCATTGGGGCTTGATTAATTACCATCCTTTTCCTCCAAGTGACCCTGCTAACACTGATGCCGATACTAATACAGATGTTGACAAAGCTGATAAAATCGAGGCATTAATTGAAAAGTTATATCAGTTTGAAAATGAGGAATCCTATCCACAGATAGTTCCAAGAGCCAATATGTCATCGCTATCAATGCCTACAGGACTCTTTCATGAGTCAGCTATTGCTGAAGAGTTGGCAAAGCAAGAGGGACCGTCAGTTGAGTATCATTGCAACTCTTGTGGTGGTGATTGCTCTCGCAAACGATACCATTGCCAGAAGCAGGCAGATTTTGATTTGTGTACTGAATGCTATAACAATGGGAAGTTTGGCACTGGAATGTCCCCTTCAGATTTTATTCTCATGGAGCCTGCTGAGGTCTCTGGTGCAAGTGGTGGGAAGTGGACTGATCAGGAAACTCTCCTCCTCCTTGAAGCATTGGAACTTTATAAAGAGAACTGGAATGAAATAGCTGAGCATGTTGCTACAAAAACCAAGGCTCAGTGCATATTGCATTTCCTGCAAATGCCTATAGAGGATAGTTTTCTTGATTATGATGGCACAAAGGATGGTATTCAGGAGATTACAGAAGCAGGCTCAGTCAATAATGATGTTTCTGCCCCAAAGGATAATTCAAAATCATCAGAGGGGAAAGCTGGTGAAGAAAATTCTGAACCAGCTGAGAATGGAAGTGATAAACAGATCTCTGAATCTGAACCATTGGAGAGCAAAATTGGTAAAGACGACACAGAAAAATCAGAGAGCAAGATGGATACTGATACTGCTCAAACTGTCTCCACCCTGACAGAACCTACAAACCTAGACACCGAAGTTGGGAAAGTGGCTGAGGATAAGGATGATGACTTTGTGCTTAAGGCACTAAAGGAGGCATTTGACGCAGTTGGTTCCCCACTTGTTCCGGACAACAAAGTTTCTTTTGCAGACATGGGAAATCCTGTCATCTCACTGGCTGCATTCCTTACTCGTTTGGTGGAGCCTGATGTTGCCACTGCATCTGCCCGTAGCTCAATAAAATCAATGTCCAGAAATTCTTCTGGGTCACTACTGGCTGCAAGGCACTGCTTTCTTCTTGAGGATCCACCAGGTGACAAGAAAGATGAGGTTGGTTCCAAGAGCACGGCTTCTGAAAGGATTGATCAGAATGGAGATAAGGAATGCAAAAATGACAAAGAGGTTAAACATAATGAGGGGAATTCTACAATCCAAAGAGAGGAGAAATCCACCTCCTTATTGGATGGAACTCATTCAACAGATGTTCAAATGCACGAAAAGGGTTCTTCTTCAGGAGAGGATCCAGAATTGCCCTCAGGAAGTCAGGATTTACATGCAGAGAAGACTCAGGTATTAGATAAGTCCGATGAAGACAAGTCCCCAACTGCGGAGAAGTCCCATGACCAGAAGTCTGATGGTGTAGAAAAACCTGCTGAAGAGAAGGCTCAGGTTGCAGAAAAACCTGCTGAAGAGAAGGCTCAGGTTGCTGAAAAACCTGATGAAGAGAAATTCCAGGTTGCAAATAAGGCTGATGAAAGGAAGTCCCAAATCGCCGAGAAGCCTAATGAAGAGAACTCTAAAATAGTAGAAAAGCCTGATGAGACTGATAGTGAGCAGACTAGAGTGAAGGCTTTGAATGAGCCAAAAAACCCTCTTACAGAGCATGACCATTCACCTGCTGTTCCAAACAATGAAGATGATTCAGCATCTAAGATTAAGTCTTCAAGTTCTGCAAATGAATCAACAAATTTGAATGCTGCAGGGGAAGCTGCTCAATGTGCAGAAGCCCCCAAGGATGTGGATATGGAGTCCAGTGCTGTTGTTTCTGACAAGGCCGAGCCACAGGAGAAAGTGCTGCCGGATCCAGTGGCTGAAGTTGAACCAAAGACAGGAGATGATAAAATGGAAGTTGACAAAAGTGGGGACCCCAAATCTGAGGAGACTACAGAGACAAAGGATGATCCCAAAGTTACAAAACTGAAACGTGCTGCAGTTGCTACACTTTCTGCTGCTGCAGTGAAGGCGAAACTTCTTGTTAAGCAGGAAGAAGATGAAATCCGTCAACTAGCTACGCTACTGATTGAGAAGCAGCTGCGCAAATTGGAGATAAAGTTGAGCTTCTTTACAGAAATGGAAAGTGCTATCATGAGGGTTCGAGAACAATTGGAACGATCAAGGCAGAAGCTCTTCTCTGAACGTGCTCAGATTATTGCAAGCCGCCTTGGTTTATCAGCTTCTTCATCTAGGGGATTGCCGTCATCATTCCCAGTGAACAGGATGCCACAAAGTCTTTTAAATTCAATGATGCGACCACCAATGAGCATGCCAGCTCAAAGATCTCCCATGGCTAGACCTGTTATGACATCAGTAGCTCCTCCTCCCACAAATGCATCTGCCCCAGTTGATGTGGCTGGAGGGGAATCAACACAGCATTCTGCTTTGGAAAATCCTTCTTCGGTTGGGGCAAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51303.p1 GENE.R_Transcript_51303~~R_Transcript_51303.p1 ORF type:complete len:1077 (+),score=315.37,SWIRM-assoc_1|PF16495.1|4.9e+03,SWIRM-assoc_1|PF16495.1|1.4e-24,SWIRM|PF04433.13|3.7e-20,Myb_DNA-binding|PF00249.27|1.5e-11,ZZ|PF00569.13|3.1e-08,Myb_DNA-bind_6|PF13921.2|2.9e-06 R_Transcript_51303:158-3388(+)
MEDKRREAGSNSPAPTISATTTTLKSGESHSPSTEPPAPRRRGQKRKSSLTGTSSSAPPKRHAREKAAAAAAVAAAGGMSSFLAPIHKGPLTRARQLSDNHAISSAINAALKNEKNSSMVAQDEAREEVNLAKQKYEALEAVIEAEFERIRSRDTDAHVVPVTAGWFSWTNINPLEKQSLPSFFNGKSESRTPEIYLEIRNWIMKKFHANPSMNIELKDLSALSVGDSDAKQEVMEFLDHWGLINYHPFPPSDPANTDADTNTDVDKADKIEALIEKLYQFENEESYPQIVPRANMSSLSMPTGLFHESAIAEELAKQEGPSVEYHCNSCGGDCSRKRYHCQKQADFDLCTECYNNGKFGTGMSPSDFILMEPAEVSGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFLQMPIEDSFLDYDGTKDGIQEITEAGSVNNDVSAPKDNSKSSEGKAGEENSEPAENGSDKQISESEPLESKIGKDDTEKSESKMDTDTAQTVSTLTEPTNLDTEVGKVAEDKDDDFVLKALKEAFDAVGSPLVPDNKVSFADMGNPVISLAAFLTRLVEPDVATASARSSIKSMSRNSSGSLLAARHCFLLEDPPGDKKDEVGSKSTASERIDQNGDKECKNDKEVKHNEGNSTIQREEKSTSLLDGTHSTDVQMHEKGSSSGEDPELPSGSQDLHAEKTQVLDKSDEDKSPTAEKSHDQKSDGVEKPAEEKAQVAEKPAEEKAQVAEKPDEEKFQVANKADERKSQIAEKPNEENSKIVEKPDETDSEQTRVKALNEPKNPLTEHDHSPAVPNNEDDSASKIKSSSSANESTNLNAAGEAAQCAEAPKDVDMESSAVVSDKAEPQEKVLPDPVAEVEPKTGDDKMEVDKSGDPKSEETTETKDDPKVTKLKRAAVATLSAAAVKAKLLVKQEEDEIRQLATLLIEKQLRKLEIKLSFFTEMESAIMRVREQLERSRQKLFSERAQIIASRLGLSASSSRGLPSSFPVNRMPQSLLNSMMRPPMSMPAQRSPMARPVMTSVAPPPTNASAPVDVAGGESTQHSALENPSSVGAN*

Click here to download the sequence:
Link to NCBI Protein BLAST