Transcript Information: R_Transcript_51340.p1


Annotated TAIR IDAT2G19380.1
Annotated Gene NameRNA recognition motif (RRM)-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8383856-8386604 | Forward length=613
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2309304463899
Replicate 24.1318020899542
Replicate 35.7036856665119
Condition 2: 8 Hour
Replicate 16.1952188420741
Replicate 28.1720491869393
Replicate 35.9047408042223
Condition 3: 24 Hour
Replicate 17.6526024092347
Replicate 25.9345475729666
Replicate 36.3289748492233


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51340.p1 GENE.R_Transcript_51340~~R_Transcript_51340.p1 ORF type:internal len:249 (+),score=63.39,zf-met|PF12874.3|4.5e-07,zf-met|PF12874.3|9.2e-10,zf-met|PF12874.3|1.1e-08,zf-C2H2_jaz|PF12171.4|0.04,zf-C2H2_jaz|PF12171.4|1.7e-05,zf-C2H2_jaz|PF12171.4|6.8e-06,zf-C2H2_2|PF12756.3|0.07,zf-C2H2_2|PF12756.3|0.0064,zf-C2H2_2|PF12756.3|0.022 R_Transcript_51340:2-745(+)
GAGATCCGACAAAAAACTAAATTTTATTGGGATGAGTCACGTTGTCAGTTTGTGAATGGCAAAGAGGATGTGACCGATTGGATAGAGTACTGTGAGGCTAGTCCTGGTACTCCAGGGTTGAAGAAGAAAGCTGAAGCTATGGAAAACACGAGCAACCAAGAGATGGCTTCAAAAGAAAGCAAGGACTCACAGAAGAAGTGGTATTGCTCCTTATGTGTAGTGTCGACAACATCAGAGGGAGCTCTAAATCACCATTTTCAAGGGAAAAAGCACAAAGCAAAGGAGGCAAATTTGAGAGCTAATGATACAACCAGCAGCATGAGCATTAATGGTTATTCCACCGAGAGCTCCCAACAACTCCTGGATAAAGAGAAATCCATAGGTCCCAACAAATGGCGCTGCTCACTTTGTCAAGTGTCTGTTTCTTCTGAGATGCATCTAAGAGCTCATCTCCAAGGAAAGAAACACAAAGCCAAGGAGGCAAAACTCGGACTAGAACAAAATGTTAGTAACTTGGATTGTAGTTCCATTGAGAAGTCTCAGGAAAATGTTCAGGCTGACGACAGTGAAGGTGTGAAAACTGAGTCCTCGAAGAAGTGGTACTGCCCATTGTGCCAAGTATCAGCTCTGTCAGAGAAAAATCTGAACGACCATTTTCAAGGGAAAAAGCACAAGGCCAAGTCAGCTGAGAAAGTGTTGGAACTTGCTGAGCTGACGAAGGACAAGAGTGCCGGAAATGATGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51340.p1 GENE.R_Transcript_51340~~R_Transcript_51340.p1 ORF type:internal len:249 (+),score=63.39,zf-met|PF12874.3|4.5e-07,zf-met|PF12874.3|9.2e-10,zf-met|PF12874.3|1.1e-08,zf-C2H2_jaz|PF12171.4|0.04,zf-C2H2_jaz|PF12171.4|1.7e-05,zf-C2H2_jaz|PF12171.4|6.8e-06,zf-C2H2_2|PF12756.3|0.07,zf-C2H2_2|PF12756.3|0.0064,zf-C2H2_2|PF12756.3|0.022 R_Transcript_51340:2-745(+)
EIRQKTKFYWDESRCQFVNGKEDVTDWIEYCEASPGTPGLKKKAEAMENTSNQEMASKESKDSQKKWYCSLCVVSTTSEGALNHHFQGKKHKAKEANLRANDTTSSMSINGYSTESSQQLLDKEKSIGPNKWRCSLCQVSVSSEMHLRAHLQGKKHKAKEAKLGLEQNVSNLDCSSIEKSQENVQADDSEGVKTESSKKWYCPLCQVSALSEKNLNDHFQGKKHKAKSAEKVLELAELTKDKSAGNDV

Click here to download the sequence:
Link to NCBI Protein BLAST