Transcript Information: R_Transcript_51430.p1


Annotated TAIR IDAT5G63110.1
Annotated Gene Namehistone deacetylase 6
Annotated Gene Symbol(s)HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1
Annotation TypeOrtholog
Chromosome Positionchr5:25315834-25318227 | Reverse length=471
E-Value1.3E-259
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.265450379296
Replicate 29.8904728507911
Replicate 312.253504342852
Condition 2: 8 Hour
Replicate 110.605654078947
Replicate 210.97959467651
Replicate 316.086457316271
Condition 3: 24 Hour
Replicate 118.283762642423
Replicate 217.124741933003
Replicate 316.950956923186


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51430.p1 GENE.R_Transcript_51430~~R_Transcript_51430.p1 ORF type:complete len:501 (+),score=70.82,Hist_deacetyl|PF00850.15|3.4e-81 R_Transcript_51430:136-1503(+)
ATGGAAGCCAACAGCAACACAGTAGAACAAGGAGGAGGAGCCTCGCTGCCATCCCAAACCTGCACAGACGCCAAGAAACGCCGAGTAACCTACTTCTACGAACCCACAATCGGGGACTACTACTACGGTCAAGGCCACCCTATGAAACCCCACCGGATCCGTATGGCCCACAATCTCATTGTCCACTACTCCCTCCACCGTCGCATGGAAATCAACCGCCCTTTCCCCGCCGCATCCACCGACATCCGCCGCTTCCACTCCGACGACTACGTCGACTTCCTCTCCTCCGTCTCACCCGACCTCTGTGGGCTGCCCAACAGTGGTGGTTCCCAGTCCCAGAAGCCAATGCTTGACCACTCTCACTCCAGGCACCTCAAGCGGTTCAATGTTGGCGATGATTGCCCGGTTTTTCCCGGTTTGTTCCCCTTTTGTCAGGCCTCGGCCGGTGGGTCCATTGGGGCTGCTGTTAAGTTGAATAGGAGGGATGCTGATATTGCCATCAATTGGGCTGGTGGCTTGCACCATGCTAAAAAGTCTGAGGCTTCTGGGTTTTGTTATGTTAATGATATTGTTCTTGGTATTCTTGAGCTCCTCAAAGTTCACCGGCGTGTATTGTACATAGATATTGATGTGCATCATGGGGACAGTGTTGAAGAGGCCTTCTACACCACTGACCGAGTTATGACTGTTTCTTTTCATAAATTTGGCGATTTTTTTCCTGGAACTGGGCACATAAAAGATGTTGGAGCAGGTCCAGGGAAGCATTATTCTCTAAATGTGCCATTAAATGATGGGATAGATGATGAGAGTTTTGGTGGCCTATTCAGATCCATTATCCAAAAAGTCATGGATGTTTATCAGCCAGATGCAGTTGTGCTCCAGTGTGGAGCTGATTCACTCTCAGGTGATCGGCTAGGTTGTTTCAATTTGTCGGTGAAAGGTCATGCAGATTGCTTGCGATTCCTTAGATCGTTTAATGTCCCTCTTATGGTGCTGGGTGGAGGCGGGTACACAATACGGAATGTAGCCCGTTGCTGGTGCTATGAGACAGCAGTTGCAGTTGGAGTAGAACCAGACAATAAATTACCATACAATGAGTATTATGAGTACTTTGGCCCAGATTACACTCTTCATGTTGAGCCTAGCAACATGGAAAACCTGAACTCCCCCAAAGATCTGCAGAAAATTAGGCATATTCTTCTAGAGCAACTATCTAGAATACCTCATGTACCAAGTGTTCCTTTCCAGACCACTCCTCCTACAACAAAGGAACCTGAAGAGCCAGAGGAGGATAAGGATCAAAGACCAAAGCCACGCATATGGAATGGTGAAGATTATGATTCTGATCCAGAGGACCACATGTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51430.p1 GENE.R_Transcript_51430~~R_Transcript_51430.p1 ORF type:complete len:501 (+),score=70.82,Hist_deacetyl|PF00850.15|3.4e-81 R_Transcript_51430:136-1503(+)
MEANSNTVEQGGGASLPSQTCTDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPAASTDIRRFHSDDYVDFLSSVSPDLCGLPNSGGSQSQKPMLDHSHSRHLKRFNVGDDCPVFPGLFPFCQASAGGSIGAAVKLNRRDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYIDIDVHHGDSVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGPGKHYSLNVPLNDGIDDESFGGLFRSIIQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPSNMENLNSPKDLQKIRHILLEQLSRIPHVPSVPFQTTPPTTKEPEEPEEDKDQRPKPRIWNGEDYDSDPEDHMS*

Click here to download the sequence:
Link to NCBI Protein BLAST