Transcript Information: R_Transcript_51508.p1


Annotated TAIR IDAT3G17900.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6128983-6133069 | Forward length=838
E-Value8.2E-290
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.140304808044
Replicate 25.2737186491641
Replicate 38.0657526747016
Condition 2: 8 Hour
Replicate 17.7883443670228
Replicate 29.1858082680927
Replicate 313.421965599582
Condition 3: 24 Hour
Replicate 111.829198794557
Replicate 29.1638047503103
Replicate 311.226440080017


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51508.p1 GENE.R_Transcript_51508~~R_Transcript_51508.p1 ORF type:complete len:852 (+),score=170.29 R_Transcript_51508:338-2893(+)
ATGAATTTCCTGCTGCGGCCAAGCCAAACTGCCGCAGCAGCAGATCAGGCAGCAGGTACGCCGCCATTGAGTAAAGCTCCTACCGCAAAAGCCGTTACGACATTGGAAGGTTTAATCGCCGAAGATAAGTCGCCTTTAGTTAATTATAATTATTATTCCAATTCCAGTGAAGATCATAACAACCGTGATGATTCCTTTGGTACTAGTAGTAATAGTAATGTTGTGAATGGGAATATGAGTTCGAGTAGTACCGGTAGTGGTGGTTTCAATTTCACTCCTCTTGCTGATAAACACATTGATGTTATGGATGATGAAGGCTGGATCGCCATTCCTTTCAAGGAACTTCCTGATGATTGGAGTAGTGCTCCAGATATGCATTGGTTCCGCTCTTTCGACCGTTCTTTTGTTTTTCCAGGTGAGCAGATTCATATTGTAGCTTGTTTGTCGGCATCCAAACAAGACACTGAAATCATAACTCCATTTAAAGTTGCTGCTGTAATGAATAAAAATGGTGCCGGACATGGTGTCAAGAACCAGAATGGAAATAGTGCACATCAAGAATCACTTTCTGAAGCACAGCAAGTAGAGCCTGGTGGTAATGGAGATGCAAATAGTGGAAGTGATCATCCTGCAGATGTGTCTGCTAGTGAATCTTTTCTTAGAATGCAGGAACATAGAAGACAAACTCAAACACTGTTACAGAGATTTAAGAACTCTCATTTTTTTGTCCGAATAGCTGAGGCAGGGGAGCAGCTATGGTCAAAAAGAAATGCTGCAGAAGGCTCAGAGCTGGCAAAGGACATGGAGAATACAAAGGACGATAAGATGGCTGGATTAGGAAACTCCATAAATGCAGTCATTGATAGTGGAAAATTTGATGCCCAGGGTTCTGGTGGTGTGGCGAGAAATTCTGTTAAGTGCTATTCTCTCGCTAATGGGGACATAGTGGTTCTTTTACAAGTGAATGTTGGTGTTGATCCTTTGAATGATCCCATACTGGAGATTCTTCAATTTGAGAAACATCATGGCGGGATTACCACTTTAGAAAGTGATATATCAGCTAGTATGGAGCATAGACCATGTGGAGACCTGTTGAAATGGCTGCTTCCTTTAGAAAACTCTCATCATCCAGTAAATAGACCTTTATCGCCTCCTTTAATTAACGCATCCCATAAATCGAGCTTTTCTGCATCAAGCGGTTCCCAGCTCTTTTCTTTTGGCCATTTCAGAAGTTACTCCATGTCTTCACTTCCACAAAATGTTGCTCCTACAACATCACCACCTATCCCTGCTGCTGCTGCTTCTTCAAAGCCTAGTGTTGATGTTGAAGATTGGGACCAATTTGCATCTCAAAAGTTTGCGAAGAATCTGAAAACTGGGAGCCAGAATTTGTTGTCCTTTCGTGGCGTTCCTTTGGAGCCCGAGAGATTTTCTGTGTGTTGTGGATTGGAAGGCATTTATATACCAGGACGAAGGTGGAGGAAGCGGCTTGAGATCATTCAACCCGTTGAAATTCATACTTTTGCTGCAAATTGCAATACAGATGACCTCCTTTGTGTCCAGATCAAGAATATTTCTCCAGCGCATGTTCCAGATATTGTTGTATATATAGATGCTATAACCATTATTTTGGAAGAGGCTTCACAAGTGGGTCTAGCTTTATCTGTTCCTATTGCATGTATTGAAGCTGGAACAGATCATAGGCTGCCAGATTTGGCACTAAGGCGAGGGGAAGAACATTCTTTTATTCTCAGGCCTGCTATTTCAGTCTTGAAGAAGTCTACAACTCATGGTGATAGATTTACTCAGTCATCGCGTCCTAAAGCTGGGATAAGGACAGCAAGCATGCGGCTGCCTCCAAAGGCTGTTGAGGGAAAAAGAAATTTATCTTTATCTGACAAGTATGCAGTTTTAGTGTCCTGTCGTTGTAACTATTCTGAATCAAGACTGTTTTTCAAGAAGCCCACAGATTGGCGACCCCGCATCTCAAGGGACTTCATGATATCAGTTGCATCTGAGATATCAAAACAAACCCTAGACCTTACTGGAAGAGTCTCTCAGCTTCCAGTTCAGGTGTTGACTCTTCAGGCATCAAACCTTACATCTGACGATCTTAATTTAACAATTCTTGCGCCAGCATCTCTTACGTCGCCTCCTTCTGTGCTGTCACTAAATTCAACACCTTCATCACCAATGAGCCCGTTTGCTGGATTTGCTACAACACAAAGACTAAGCACAGTACCTCGTGTTGTCGAAAATCAAAAACAAATTGCTGCTCATTCGACTCCTTTAGTTGAGCAGGCTGTTCCTGTTGCTGATGTGATTCCAACAACTGCTTTGAGCTGTACTCATTTATGGCTGCAGAGTAGGGTTCCACTAGGATGTGTTCCTTCTCAATCCACTGCCACTATCAAGCTTGAACTGCTGCCACTGACAGACGGCATAATTACGCTTGACACTTTGCAGATATATGTTAAGGAGAAAGGGGTAACATATATCCCAGAACATCCGCTGAAGATAAACGCAACATCAAGCATAGCTACTGGAATCCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51508.p1 GENE.R_Transcript_51508~~R_Transcript_51508.p1 ORF type:complete len:852 (+),score=170.29 R_Transcript_51508:338-2893(+)
MNFLLRPSQTAAAADQAAGTPPLSKAPTAKAVTTLEGLIAEDKSPLVNYNYYSNSSEDHNNRDDSFGTSSNSNVVNGNMSSSSTGSGGFNFTPLADKHIDVMDDEGWIAIPFKELPDDWSSAPDMHWFRSFDRSFVFPGEQIHIVACLSASKQDTEIITPFKVAAVMNKNGAGHGVKNQNGNSAHQESLSEAQQVEPGGNGDANSGSDHPADVSASESFLRMQEHRRQTQTLLQRFKNSHFFVRIAEAGEQLWSKRNAAEGSELAKDMENTKDDKMAGLGNSINAVIDSGKFDAQGSGGVARNSVKCYSLANGDIVVLLQVNVGVDPLNDPILEILQFEKHHGGITTLESDISASMEHRPCGDLLKWLLPLENSHHPVNRPLSPPLINASHKSSFSASSGSQLFSFGHFRSYSMSSLPQNVAPTTSPPIPAAAASSKPSVDVEDWDQFASQKFAKNLKTGSQNLLSFRGVPLEPERFSVCCGLEGIYIPGRRWRKRLEIIQPVEIHTFAANCNTDDLLCVQIKNISPAHVPDIVVYIDAITIILEEASQVGLALSVPIACIEAGTDHRLPDLALRRGEEHSFILRPAISVLKKSTTHGDRFTQSSRPKAGIRTASMRLPPKAVEGKRNLSLSDKYAVLVSCRCNYSESRLFFKKPTDWRPRISRDFMISVASEISKQTLDLTGRVSQLPVQVLTLQASNLTSDDLNLTILAPASLTSPPSVLSLNSTPSSPMSPFAGFATTQRLSTVPRVVENQKQIAAHSTPLVEQAVPVADVIPTTALSCTHLWLQSRVPLGCVPSQSTATIKLELLPLTDGIITLDTLQIYVKEKGVTYIPEHPLKINATSSIATGIL*

Click here to download the sequence:
Link to NCBI Protein BLAST