Transcript Information: R_Transcript_5152.p1


Annotated TAIR IDAT1G67340.1
Annotated Gene NameHCP-like superfamily protein with MYND-type zinc finger
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25230323-25231622 | Forward length=379
E-Value1.2E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.25948451766
Replicate 228.508738179928
Replicate 336.514180342491
Condition 2: 8 Hour
Replicate 148.578608209558
Replicate 262.261721456879
Replicate 357.493977676042
Condition 3: 24 Hour
Replicate 140.650062338962
Replicate 231.81825193159
Replicate 338.152879729454


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5152.p1 GENE.R_Transcript_5152~~R_Transcript_5152.p1 ORF type:complete len:436 (+),score=13.24,zf-MYND|PF01753.14|1.2e-08 R_Transcript_5152:434-1741(+)
ATGAGAACAAGAAGGGGCCTTTGTTACCCTAAATTGAATTCTAACTCAAACGCCATGACTGTTTGTTTTGAGCAAAGCACAAACAACAACGAAAACGTGAAATCAATGAAGAGAAGCAGAGGTCTTGTGGTTGTTAATGGCGATTTCACAACTAACACTCCTAACAAAAGGAGAGAATTAGAATTATCCTCTTTTTCCCCTCCTAACACCGAAATTAACACTAACTTTAGGCTTTGTTCAGCTATTACCAGTAGTGAATGTGATAAGAGAGAGATTCATCATCGCCGGAAAAGAGCGAGAATCTCACCGGAAAGCGACATCGACGGTCCAGATTTCTTTGACAATTTACCTGACGATCTCCTTATTTCTATTCTCTCTAAACTCAGCTCCTCCGCTTCTTGTCCTGCCGATTTCATCAGCGTCCTCCTCACTTGTAAGAGATTGAACGGATTAGGTTTAAATTCAACGGTACTCTCAAAAGCATCTCCGAAAACCTTGGCAATTAAAGCCAAAAACTGGTCGGATTCTTCTCACCGCTTTCTCAAACTCTGCTCTGATTCTGGAAATGTCGAAGCTTCCTACACTCTCGGCATGATTCGGTTCTACTGTTTGCAAAACCGGGGGAGTGGAGCTTCATTAATGGCAAAAGCAGCGATTAACTCACACGCGCAGGCTTTATACTCGTTAGCAGTGATACAATTCAACGGGAGTGGAGGCACAAAGAGCGACAAAGACCTACGCGCCGGAGTGGCGTTATGTGCACGCGCCGCCTTCTTAGGCCACGTGGATGCCCTCCGTGAGCTCGGCCATTGTCTCCAAGACGGTTACGGCGTCCGGCAAAACGTGGCTGAAGGACGTCGGTTTCTGGTCCAAGCCAACGCACGTGAGCTGGCCGCCGCCCTCACGTGCCCCTCATCCACGCCTTACTGGATCACGCCGAATGGGCCTAGGAGTGTGGGATGTCCGTTGTTGAGTGACTTCGGGTGTAATGTGCCGGCCCAAGAGGCCCACCCGGCGAACAGGTTTATGGTGGAGTGGTTTATGGGCCGGCCCGGAGAGGAAGTTGGGCCGGATGGGCTGAGGATGTGTTCGCATGAAGGGTGTGGGAGGCCGGAGACAAGGAGGCATGAGTTTAGAAGGTGTTCGGTGTGTGGGAAGGTGAATTACTGCTCACGTGCTTGTCAGGCGCTGGATTGGAAGCTCAAGCATAAGTCTGAGTGTGCTCCCATGGACAGATGGCTTGATCTTGACGTCGATGATGGTAACCTCATCAACGCCGGTGACGGTGACGGCCACGGTGAGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5152.p1 GENE.R_Transcript_5152~~R_Transcript_5152.p1 ORF type:complete len:436 (+),score=13.24,zf-MYND|PF01753.14|1.2e-08 R_Transcript_5152:434-1741(+)
MRTRRGLCYPKLNSNSNAMTVCFEQSTNNNENVKSMKRSRGLVVVNGDFTTNTPNKRRELELSSFSPPNTEINTNFRLCSAITSSECDKREIHHRRKRARISPESDIDGPDFFDNLPDDLLISILSKLSSSASCPADFISVLLTCKRLNGLGLNSTVLSKASPKTLAIKAKNWSDSSHRFLKLCSDSGNVEASYTLGMIRFYCLQNRGSGASLMAKAAINSHAQALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAALTCPSSTPYWITPNGPRSVGCPLLSDFGCNVPAQEAHPANRFMVEWFMGRPGEEVGPDGLRMCSHEGCGRPETRRHEFRRCSVCGKVNYCSRACQALDWKLKHKSECAPMDRWLDLDVDDGNLINAGDGDGHGES*

Click here to download the sequence:
Link to NCBI Protein BLAST