Transcript Information: R_Transcript_51577.p1


Annotated TAIR IDAT2G32590.1
Annotated Gene NameLOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:13829420-13833209 | Reverse length=671
E-Value6.7E-246
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.060442268406
Replicate 24.9224322249498
Replicate 36.4642747196089
Condition 2: 8 Hour
Replicate 15.0318275289563
Replicate 25.274708741119
Replicate 39.0101337811762
Condition 3: 24 Hour
Replicate 111.595187731503
Replicate 29.9583802805501
Replicate 312.353407855123


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51577.p1 GENE.R_Transcript_51577~~R_Transcript_51577.p1 ORF type:complete len:691 (+),score=170.46,Cnd2|PF05786.10|1.8e-96,Cnd2|PF05786.10|1.3e-28,CNDH2_N|PF06278.7|1.6e-05,CNDH2_N|PF06278.7|3.9e+02 R_Transcript_51577:186-2258(+)
ATGGCGGAAACCCTAAGCCCAACAGGCCAGAAGAGAAGAGTGTCCATCTCCACAAGACTCCTCCAGTCCCCAACCAGTCCCTTCTTCTTAGGCTCCAACGACGACAAACTCGAACGCGCTCAGGCACGTGCCGCACGCGCCGCCGCCATTCGCCGGAAACCTCTCGACCTCGTTGATGACTCCGCCGCCGCTCCGGACGAATCCTCCTCTTGCCTCGACGGTGACCAGATCATTGAGCTCTTTCGCAATTGCATCAAGCTCGCCAGTGAAAATAAAATAAATCAGAAGAATACCTGGGAGCTGAAGCTTATCGATCATCTTAGTGAGATCATCAAAGTTGAAGATGAAGAAGATGCTGAGACGAACTTCCAGAAGGCAAGTTGTACTCTGGAAGCTGGGGTGAAGATTTATGCACTTAGGGTGGATTCAGTGCATTCTGAAGCTTATAAAGTCCTTGGTGGAATCAGTAGAGCTGGGTTTGAAGACCAACAAGAAACTTCAGTGGAAGGTGACAATGGAGGCAATGAAAATGATGATCAGCCTCGAAAGGAGCAGGAGAGGAAGTTATCGCCTTTGTCAACGCTGGAGTCCTCTTTTGATGCTTTAAATGTCAAAAAGTTTGATGTTGCGTTTGCAGTTGATCCTCTGTATCATCAGACAACTGCACAATTTGATGAGGGTGGGGCAAAGGGTCTCCTTTTGAACAACCTTGGTGTTTATGGAGGATGTCGGGTACTTTTTGATTCACAAGAAGTGCCAGCAAAGTGTATATCTTCCACAGCTGATAATAATTCTTCCAATCTGATAGACATCTCTTTTGCTGGAGAAGTCATTGAGCAAATAATGATGATTGTGCATGCTAAGAAAGATATATGTCCTACATTTAGTGCTATTGTCGAGCAGCTTGATGAATACAGTTTGCAACAAAGGAAATCTCATAATACTCAGGATTCTAGTTGTGATCATATTGCAACTAATGACAGTATGGTTGAGTTCAATGGGGACCCAGAGTTTACTAGCTTCGATAAGGCAGCCGATGATGAAGGTGTTGGGTTGGATGACGGTTATGATAATGCTGACGAATGGTCATTTGATTGTAATGGAGAGGCTAATGTTGGGGATGATGATTTTAACATTAGTGATCAAAATATGCAAAATCATTACGAGGAGGAAGACCCCTTTACGTCCGGGGAACCTGATATGTATGACAGATTTGAAAATGTTGCTTCACTTCTATTTGGGGGTGCTGGAATTACATCAGGTCAGAATGCATGGGCTGGGCCTGATCACTGGAAGTATCGAAAAACTAAGGGTGAGGATGTCACTGCACAAGATAGTGAGCTAGCTTCTACCACTAAGAGACCAAAGGCTAAAAAGGCATCTGAAGCAGATATTGATTTTACCAAATCTTTGGACGAAGACCTGTCTCACATTTTTGCGCCCCCCAAAAACCCCAAGTCTTTGTTGCTCCCTGCCAAGAAAGTACCTTGCTCCAACAAACTTCCAGAGGATTGCCATTACCAACCAGAGGATCTTGTGAAATTGTTTCTTCTTCCAAATGTTATGTGCTTGGGGAAGAGAAGAAGGAGAAGAGGAGCAGATGGTGGCTCATGGCAAGATGGAAATGATTTCGATGGATCATTTCCTACCTGGGACGATGAAAGTACTTACAGTGGGCAAGGAAATGATGATTATGGTCACAGTGATGTTGAAGGACAAGATATGCTTGTCTCCCAGCCGCGTCAGGTCAACAAAATTGAAGTGCAGTATGACAGAACTGCAAAACAAGTTGATGTACATTTGCTTAAAGAAACACTTTGGGATCACCTACATGGGTCAACACAAGAACCTGAAATGAAGGCCAATGAGGATGCCATATCTTTCAGACATGTATTAGCCACTTTTCCTGATGACTGTGGAGCAGCAGCACCTAACGACATCTCTCCTCATCTATGCTTCATCTGTCTTCTGCATCTGGCTAATGAACATGGTCTGAGGATCCAAGGATGCACAAATATGGATGACCTCAGCATACATCTTCCTGTCTCATGCCAGGACACAGGTTGTACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51577.p1 GENE.R_Transcript_51577~~R_Transcript_51577.p1 ORF type:complete len:691 (+),score=170.46,Cnd2|PF05786.10|1.8e-96,Cnd2|PF05786.10|1.3e-28,CNDH2_N|PF06278.7|1.6e-05,CNDH2_N|PF06278.7|3.9e+02 R_Transcript_51577:186-2258(+)
MAETLSPTGQKRRVSISTRLLQSPTSPFFLGSNDDKLERAQARAARAAAIRRKPLDLVDDSAAAPDESSSCLDGDQIIELFRNCIKLASENKINQKNTWELKLIDHLSEIIKVEDEEDAETNFQKASCTLEAGVKIYALRVDSVHSEAYKVLGGISRAGFEDQQETSVEGDNGGNENDDQPRKEQERKLSPLSTLESSFDALNVKKFDVAFAVDPLYHQTTAQFDEGGAKGLLLNNLGVYGGCRVLFDSQEVPAKCISSTADNNSSNLIDISFAGEVIEQIMMIVHAKKDICPTFSAIVEQLDEYSLQQRKSHNTQDSSCDHIATNDSMVEFNGDPEFTSFDKAADDEGVGLDDGYDNADEWSFDCNGEANVGDDDFNISDQNMQNHYEEEDPFTSGEPDMYDRFENVASLLFGGAGITSGQNAWAGPDHWKYRKTKGEDVTAQDSELASTTKRPKAKKASEADIDFTKSLDEDLSHIFAPPKNPKSLLLPAKKVPCSNKLPEDCHYQPEDLVKLFLLPNVMCLGKRRRRRGADGGSWQDGNDFDGSFPTWDDESTYSGQGNDDYGHSDVEGQDMLVSQPRQVNKIEVQYDRTAKQVDVHLLKETLWDHLHGSTQEPEMKANEDAISFRHVLATFPDDCGAAAPNDISPHLCFICLLHLANEHGLRIQGCTNMDDLSIHLPVSCQDTGCT*

Click here to download the sequence:
Link to NCBI Protein BLAST