Transcript Information: R_Transcript_51629.p1


Annotated TAIR IDAT5G24810.2
Annotated Gene NameABC1 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8516902-8522616 | Reverse length=1040
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.182653726502
Replicate 220.174612037493
Replicate 327.601321305354
Condition 2: 8 Hour
Replicate 126.251066333761
Replicate 232.7698608239
Replicate 341.294446818161
Condition 3: 24 Hour
Replicate 132.65162902313
Replicate 225.507781394561
Replicate 332.842827733068


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51629.p1 GENE.R_Transcript_51629~~R_Transcript_51629.p1 ORF type:complete len:971 (+),score=199.19,Beta-lactamase|PF00144.20|1.1e-42,Beta-lactamase|PF00144.20|0.23,ABC1|PF03109.12|1.8e-28 R_Transcript_51629:185-3097(+)
ATGGGGTGGGGTAACATATACAAGAGGCGCATTAAAGTGTTTGCATTGGCGTTACTGATCTACTTGGATTATAAGGCTTTGCAGAAGAGAGGCAAGTGGATAAAAAACAAATCAAAAAAGGCGGCTCTATGGAAAAAGGCTCATGAACGCAATGCTAAGCGTCTTCTCAACTTTATGATAGAAATGGAGGGTTTATGGGTCAAACTAGGACAATACTTGTCTACACGCGCTGATGTTCTTCCAGAGGCCTATATACACCTTCTCAAACAGCTTCAGGATTCCCTTCCTCCTCGGCCTTTAGAGGAGGTCTGTCATACTATAGAAAAAGAGCTGGGAAAATCAATGGGTGATCTTTTCTCAGAATTTGTGAAAGCACCTCTGGCTACTGCATCAATAGCACAAGTGCATCGTGCTACTCTCCAAACTGGGGAGGATGTGGTGGTCAAAGTTCAGCATGAGGGCATTAAACATGTTATATTGGAGGACTTGAAGAATGCAAAATCTATTGTTGAGTGGATAGCATGGGCAGAACCAGTTTACAATTTCAATCCGATGATAGATGAATGGTGTAAGGAAGCACCAAAAGAACTCGATTTTAACATTGAAGCTGAGAACACCAGAAAGGTGGCGAGCAATCTTGGTTGCAGCAAAATGAACAATAACAACAGAGGTGTAAATTGTGTTGATGTATTGATTCCTGAAGTTCTACAGTCAACTGAAAAAGTTATCATTTTGGAGTATATGGATGGAATTCGCCTGAATGATTTCAATTCTATGCAAGCACTGGGAGTTGACAGAAAGAAACTCGTGGAAGAAATTACACGTGCATATGCCCACCAAATTTATGTCGATGGATTTTTTAATGGCGACCCTCATCCTGGGAACTTTCTTGTGAGCAGGGAATTTCCACATCGCCCAGTTTTGCTTGATTTTGGCTTAACAAAGTCACTTCCAACCACTACAAAACAGGCTCTCGCAAAGATGCTCTTAGCATCTGCAGAGGGGGATCATGTAGCACTTTTATCTGCCTTTGCAGAGATGGGACTTAAGTTGCGGATGGACTTGCCTGAGCAGGCAATGGAGGTGACAACTATATTCTTTCGTAGCTCGACACCGGCAAGTGAAGCCCCTGAAACCTTGAAAAATTTTAGTGAAGAAAGAGCCAAGAAATTGAAGGCCTTACAGGAAAAGATGCAACTCAATGAAAAAGAAGCCAAACGATTTAATCCTGTTGATGCCTTTCCTGGAGATATAGTGATATTTTCACGGGTGCTTAATCTTCTAAGAGGTCTTTCTGCTACAATGGATGTCCGTATTACTTACTTTGATATCATGAGACCGTTTGCAGAGTCTGTTTTGGGCGGAATGATCAATAAGGGACCAGCACTAGATACACAATGGATCTGTGACACTCCTGTCCATTCAGATGTGGAGGATAAGTTGCGGAAGCTCTTGATTGATTTGGGAAATGCTGGCAAGATACTTGGAGTGCAGATTTGTGCCTACAAAGATGGGGAAGTGATCATTGACACAGCTGCCGGAGTGCTGGGAAAGTATGATCCGCGTCCAGTGCAGCCTGATTCATTGTTTCCTGTATTCTCAGTTACAAAGGGCATCACTGCAGGATTGGTACATTGGCTGGTAGATAACAGAAAACTTAAGTACGACGAAAATGTTGCAAATATTTGGCCTGAATTTAGGTCAAACAATAAGGACATGATAAAGGTTCATCATGTTCTTAACCATACATCTGGTCTCCACAATTCAATGGCCAATATCATGAAAGACAATCCTTTGTTATTATCTGCCTGGAACGAGTGTTTACAGGACATTGCTTCGTCTGTTCCTGAGACTGAACCTGGCCAACAACAGTTGTATCATTATCTTTCATTTGGATGGCTATGTGGTGGAATTATTGAGCATGCTTCTGGGAAAAAATTCCAGGAGATCCTTGAAGAAGCATTCATCCATCCTCTAAATATTGAGGGTGAGTTGTATGTTGGTGTTCCCCCAGGTGTGGAAGCACGATTAGCAGCACTCACTATAGACACAGATGATCTCAAGATGATCCCTGCCTTGAACACTCGCACTGATCTTCCTTCTACCTTCCAACCGAGTCAAATTGCGCAGGTTGCCACTGCTCTCCCAGCCCTTTTCAATTCCCTTTTCATTCGCCGTGCTATCATCCCTGCTGCCAATGGACACTGCTCGGCCCGTGCTCTTGCTCGCTACTATGCTTGTTTGGCGGATTGTGGAGTAATTCCACCACGGCCTTCCTCCTCCTTGCCGGGACTTGGAAGCCACCCCCATATCCCCAAGTTCTCTTCTGAGAAACCCTTGAAGAAGGAAAACGGCGGCAGAAAGAAGCGTCTGAATTTGGTTTCCCTCTGCAAAACTATGATGTCTGAAAATTTTAATTACGAAAAAGGTTCAAAAGATGGCAATGGTCCGACTTATAGTAAGGTTCCAAATGATGAGGGTTCTAGCAGTACTAGTGATCTCGATCAAAGCACTGCTGCATCTACTGTAAATGGTGAAAATCATCACGAGGAGATGAAAAAACTTTTCAGCAACCCCAAAATCCATGACGCGTTCATGGGGCTAGGAGAATATGAGCATTTGGCCTTGCCGAATGGGGAATTCGGGTTAGGATTCAAGCGGATAACTTCTGCTGACGGATCCGTTATTGGTTTTGGTCACTCTGGCATGGGTGGATCAACTGGTTTTTGTGATATACAAAACAGGTTTTCAATTGCTGTTACTGTAAATAAGATGTCATTTGGGGCTGTAACTGGAGAAATTATTCAGCTTGTTTGTTCAGAGCTGAACATTCCTTTACCAAAGGAGTTAAAAGGACTTGGCACGAGGGGAGCAGACTCTGAGGTAAATTCTGGAAGACCTCTGATTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51629.p1 GENE.R_Transcript_51629~~R_Transcript_51629.p1 ORF type:complete len:971 (+),score=199.19,Beta-lactamase|PF00144.20|1.1e-42,Beta-lactamase|PF00144.20|0.23,ABC1|PF03109.12|1.8e-28 R_Transcript_51629:185-3097(+)
MGWGNIYKRRIKVFALALLIYLDYKALQKRGKWIKNKSKKAALWKKAHERNAKRLLNFMIEMEGLWVKLGQYLSTRADVLPEAYIHLLKQLQDSLPPRPLEEVCHTIEKELGKSMGDLFSEFVKAPLATASIAQVHRATLQTGEDVVVKVQHEGIKHVILEDLKNAKSIVEWIAWAEPVYNFNPMIDEWCKEAPKELDFNIEAENTRKVASNLGCSKMNNNNRGVNCVDVLIPEVLQSTEKVIILEYMDGIRLNDFNSMQALGVDRKKLVEEITRAYAHQIYVDGFFNGDPHPGNFLVSREFPHRPVLLDFGLTKSLPTTTKQALAKMLLASAEGDHVALLSAFAEMGLKLRMDLPEQAMEVTTIFFRSSTPASEAPETLKNFSEERAKKLKALQEKMQLNEKEAKRFNPVDAFPGDIVIFSRVLNLLRGLSATMDVRITYFDIMRPFAESVLGGMINKGPALDTQWICDTPVHSDVEDKLRKLLIDLGNAGKILGVQICAYKDGEVIIDTAAGVLGKYDPRPVQPDSLFPVFSVTKGITAGLVHWLVDNRKLKYDENVANIWPEFRSNNKDMIKVHHVLNHTSGLHNSMANIMKDNPLLLSAWNECLQDIASSVPETEPGQQQLYHYLSFGWLCGGIIEHASGKKFQEILEEAFIHPLNIEGELYVGVPPGVEARLAALTIDTDDLKMIPALNTRTDLPSTFQPSQIAQVATALPALFNSLFIRRAIIPAANGHCSARALARYYACLADCGVIPPRPSSSLPGLGSHPHIPKFSSEKPLKKENGGRKKRLNLVSLCKTMMSENFNYEKGSKDGNGPTYSKVPNDEGSSSTSDLDQSTAASTVNGENHHEEMKKLFSNPKIHDAFMGLGEYEHLALPNGEFGLGFKRITSADGSVIGFGHSGMGGSTGFCDIQNRFSIAVTVNKMSFGAVTGEIIQLVCSELNIPLPKELKGLGTRGADSEVNSGRPLIN*

Click here to download the sequence:
Link to NCBI Protein BLAST