Transcript Information: R_Transcript_5169.p1


Annotated TAIR IDAT4G12570.1
Annotated Gene Nameubiquitin protein ligase 5
Annotated Gene Symbol(s)UPL5
Annotation TypeOrtholog
Chromosome Positionchr4:7445585-7448819 | Forward length=873
E-Value5.9E-225
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.295062884134
Replicate 24.9028010396172
Replicate 36.5961809831853
Condition 2: 8 Hour
Replicate 18.0508498360576
Replicate 29.6233742792956
Replicate 312.867686272253
Condition 3: 24 Hour
Replicate 18.606172761799
Replicate 25.1500761597892
Replicate 37.9987528122797


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5169.p1 GENE.R_Transcript_5169~~R_Transcript_5169.p1 ORF type:5prime_partial len:955 (+),score=171.20,HECT|PF00632.21|9.3e-71,ubiquitin|PF00240.19|7.4e-16 R_Transcript_5169:3-2867(+)
ACCACCGTCTTAATCACCACCACCACCACAACGATCATCATAATTCTTTCTCTCTTTTCAATGTCATCCATTGATCATCATCATCATCGCCATAATCACAATCCTAATCCTAATCCTAATCATAATTGCCGTCTTCCTTCAAAGCGCAAACTGGACGATTACGACTCCACCGCCGGCGGCGATGATTCCGCCACTTCCCGATCATCGCGCTCCAAGGGCAAATCCGTCATCGACTCGGACAATTTCAAGAACCTCCTTCAAGGAGAATCATCATCAGGTGGAAGCGTTGGTGATGGTGAATTCTTCCAAGATTCCCCAAGATTGCCGCTCCAGTTCTTTGTGAGGTTGATCTCAGGGGGCAAAACCCTAGTTTTACAAGCGAATTGTACGGACACAATTGAGATGGTCCACCAGAAGATCCAGAACCACACTGGCATACCAGTCATTGAGCAAAGGTTGATTTACAGAGGCAAGCAGCTTCGGTGGGAGCAAACCCTCGACCAATGCGGTATCCAGAATGATGCTGGTCTTCAACTGGTTGGCCGTATGAGGAGCACCGACCAGCCCAAGGCGTGGCGGGTAATTAATGAAATGGTTTCTAATATTTTCAGAATTTGTAGGAAAGAAATCCCCCCTAATTTCTGTCCTGGTGCTGTTAAGGGTAAATTAGAACAGTACATGGCTTTGCCTCTTGATAAACAGAACAATCATTTAGCTTCTTTGCTTTATAAGAATGATAGGAAAAAAAATAGTCATAAAAAGAAGGAATTGGTTAATGGTGAGGATGATGATGACGAGGATGATGACGAGGAGGAAGAGGATAGGAAGGAGACTATTGTGAATTTTAATAAGATGTATTATTGTAAGATATTTATGGATGCTTGTGCTCCTCAGGCTTTAGTCATGCTTTATATGTCGTCCGAGAAACGGAACCAGGAGTGTGCCGATGATTGCATTCGTTGTTTTGTGAACTTTGTGAAGGAATTGGAGGGGAAGTCGGATGAGAGGGGTTATTGTGCTACTATTGTGTTGGAGTTTTGTAGGTTGTTGAGGACCTCGGCGGGTGCTGAGGATAATGTGCTCTATGTACATTGTCGGAGCACTCTTGGTTCGATGGTTGAGAAGATTGACTTGGCGAGGGGAGCCAATGATGTGTTCCATAGGCCAAATAGGAAGACAAGTGTCATTGGTATACAGGATGTGTTCCCGTTCTTGAAGGAGTTGGCGCAGCGGTTGGTGAAACATTTGGTGCAGAGTCTGGAATCTGAGGCTAATGTAGGGCCGTTCTTGAGGGATGTGTATGATTTCTCTGCGTTTCTGCAGCCTGTGCTGAGTTTCGTTCGGAGGAGGCTAATAGAGTCGAAGTTTCATAACACTAAGGGAGAAGTTAATCCTTTAGGTGAGGAGGTTGACCAACTTTTTGGTCTTTTTGATGAGTTGCTTAGTTGGATTGATAAGTGTCTGAGTGCAATGGAGCAGAACGTTTTGACAAAGAAGGAACAAGGAGGGGATGAAAATCAGATGGCATGTTCAGTATATCTTGCCATTTTGAAGGAACTGAGTTGCATCTCCGTGCTTTATCCTGGCTCTGAGGACCGATTCTGGACCATTTTAAGGCAATATAAGGCTGCAGTGCGTGTCCTAGTTGTTAAGTATGCCAAGCGTACTGATGATCATAATTGGCTTCTTAAGCATAAGGATGTCTTGGATTTTGAATCAAGGAGGCATTTAGCGATGTTGATGTTTCCTGAGGTGAGAGAAGACTATGAGGAGTTGCACGAGATGTTAATAGATAGGTCCCAGTTGCTGGCCGAGTCATTTGAGTATATATCACGCGCACAACCATCTGCTCTGCATGCAGGTCTCTTTATGGAGTTCAAGAACGAAGAAGCTACGGGCCCAGGTGTATTAAGGGAATGGTTTTGCTTAGTATGCCAAGCAATTTTTGATCCTCAAAATGCCCTTTTTGTACCATGCCCTTTGGATCGTCGGAGGTTCTTCCCCAATCCAGCATCTAAGGTAGACCCTCTCCACCTCAAATACTTCCGCTTCTCGGGTAGGGTAATTGCTCTGGCATTGATGCACAAGATTCAAGTTGGTGTGGTTTTAGATCGTGTCTTTTTCTTGCAATTAGCTGGGAGTTATGTTTCCTTGGAGGATATACGGGATGCAGATCCGTGCATCTACAATAGCTGCAAACAAATATTGGAGATGGATGCTGAATTTGTGGATTCTGATGGTTTAGGGCTGACATTTGTTACTGAAGTTGAAGTGTTAGGATCAAGGAAAGTTGTAGAACTTTGTTCAGGAGGGAAAGAGATTGTTGTAAACAGCAAGAACAGGAAGGAATATGTCAACCTAATTGTTCAGCATCACTTCGTCACATCTATTGCTGATCAAGTGTCCTCCTTCTCTCAAGGTTTTGCTGATATTCTTCGTGATAGCAAACTCCGACAAACCTTTTTTGATAGCTTAGAACTTGAAGATCTTGATTGGATGTTGCATGGAAGTGGAAGTGATATCAATGTTGAAGATTGGAAGGCGCACACTGACTACCATGACTATATTGAATCTGATCCTCAAATAGTTTGGTTTTGGGAGGTTCTAATGCAACTGAATAACGAGCAGAAGAAGACTCTGCTATTCTTTTGGACATCAGTGAAATATCTTCCTGTCGAAGGGTTTCGTGGTTTGGCATCTCGCCTGTATATCTACAAAACCTTGGAGCCTCCAGACCACTTGCCCTCATCGCATACATGTTTTTACCGCCTTTGTATCCCTCCGTACCCGTCTAAAGCTGTTATGCAAGATCGTCTCCTCTTGATTACCCAAGAGCATGTTGGCTCCAGCTTTGGCACTTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5169.p1 GENE.R_Transcript_5169~~R_Transcript_5169.p1 ORF type:5prime_partial len:955 (+),score=171.20,HECT|PF00632.21|9.3e-71,ubiquitin|PF00240.19|7.4e-16 R_Transcript_5169:3-2867(+)
TTVLITTTTTTIIIILSLFSMSSIDHHHHRHNHNPNPNPNHNCRLPSKRKLDDYDSTAGGDDSATSRSSRSKGKSVIDSDNFKNLLQGESSSGGSVGDGEFFQDSPRLPLQFFVRLISGGKTLVLQANCTDTIEMVHQKIQNHTGIPVIEQRLIYRGKQLRWEQTLDQCGIQNDAGLQLVGRMRSTDQPKAWRVINEMVSNIFRICRKEIPPNFCPGAVKGKLEQYMALPLDKQNNHLASLLYKNDRKKNSHKKKELVNGEDDDDEDDDEEEEDRKETIVNFNKMYYCKIFMDACAPQALVMLYMSSEKRNQECADDCIRCFVNFVKELEGKSDERGYCATIVLEFCRLLRTSAGAEDNVLYVHCRSTLGSMVEKIDLARGANDVFHRPNRKTSVIGIQDVFPFLKELAQRLVKHLVQSLESEANVGPFLRDVYDFSAFLQPVLSFVRRRLIESKFHNTKGEVNPLGEEVDQLFGLFDELLSWIDKCLSAMEQNVLTKKEQGGDENQMACSVYLAILKELSCISVLYPGSEDRFWTILRQYKAAVRVLVVKYAKRTDDHNWLLKHKDVLDFESRRHLAMLMFPEVREDYEELHEMLIDRSQLLAESFEYISRAQPSALHAGLFMEFKNEEATGPGVLREWFCLVCQAIFDPQNALFVPCPLDRRRFFPNPASKVDPLHLKYFRFSGRVIALALMHKIQVGVVLDRVFFLQLAGSYVSLEDIRDADPCIYNSCKQILEMDAEFVDSDGLGLTFVTEVEVLGSRKVVELCSGGKEIVVNSKNRKEYVNLIVQHHFVTSIADQVSSFSQGFADILRDSKLRQTFFDSLELEDLDWMLHGSGSDINVEDWKAHTDYHDYIESDPQIVWFWEVLMQLNNEQKKTLLFFWTSVKYLPVEGFRGLASRLYIYKTLEPPDHLPSSHTCFYRLCIPPYPSKAVMQDRLLLITQEHVGSSFGTW*

Click here to download the sequence:
Link to NCBI Protein BLAST