Transcript Information: R_Transcript_51704.p2


Annotated TAIR IDAT5G23490.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08440.1); Has 202 Blast hits to 197 proteins in 48 species: Archae - 0; Bacteria - 13; Metazoa - 25; Fungi - 9; Plants - 109; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7919831-7926499 | Forward length=729
E-Value1.9E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.448602728995
Replicate 210.498150208149
Replicate 39.3524549948788
Condition 2: 8 Hour
Replicate 18.186102778221
Replicate 211.114284465441
Replicate 310.740598000229
Condition 3: 24 Hour
Replicate 18.3544683106734
Replicate 27.8302694286073
Replicate 36.3461392287454


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51704.p2 GENE.R_Transcript_51704~~R_Transcript_51704.p2 ORF type:complete len:338 (+),score=66.45 R_Transcript_51704:1531-2544(+)
ATGAAGATTGCTGCTGTGAACTTGAAACAAATTACTACCATCTGCTTTATTTGGGATACCGTTGCCCATGAGGTATCAACACAAGCCGGTGTCAGCCGTGATGAAATGAATGCCGCAAGGCAAGTCAAGTTTAAAGATCAAGTGAGTAGCTCTGAGGTATATGGAGTGGCTGCAGAAGGGCATCATAATGAGAGAGAAAATGCTGGAACTTGGGGATTAGGAACCTCGCCTTATTCACACACACTTGAGGATCCAAATTCATCCTATCCCTATCTTCAACCAGTTCCTGAAGAACCGTCGTCCTCTTTTTCTGAGGCTGCCGATGATGATCCTCTACCAGCTATAGAGGGTCTCCAAATATCAGGTGAAGCTTATCCTGGGCGAGAACTCCAAGCTTGTGGGTATTCTATCAATGGAACAACAAGTTGTAACTTTGAGTGGGTGCGGCATTATGAAGATGGATCTGTGAAGTATATAGATGGGGCAAAACAACCTATCTACCTCGTCACTGCTGATGATGTGGAGCACTATCTGGCTATTGAAGTCCAACCTTTGGATGACAGGAAGAGAAAGGGGGCACTTGTAAGAGTGTTTGCTAACGAGAACAGAAAAATCACTTGTGATCCTGCTATGCAGAATTATATAGAACAGACCTTGCGGAATGGTCATGCCTCATATAAAGTTTCAATATCGACAGGTTATCTTGATATCTGGGAGCCAGCTACTTTGACAATCAAGCGTGAGGGCTACAGCATCAAGGGTAGTGGATCTAGTGGTGTGACCATCAATGAGAAGTTTTCATCAGGAACCACTGTAAACATTACCTATGGACATGATGTAGAATTTTCTATATCTAATGCCAGTGGGGTCTTGCATCTTTTACGAGCAGAAAATTACATGGAAGATATTGCTAGTTTCAGAGATGCGATTGTGCTCACATTGAGATTATTCATCATGAAGGCTTCGCAGAACGGGAAAGGAAAGAAGAAGCGGGTTAAACTCTTTAGCAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51704.p2 GENE.R_Transcript_51704~~R_Transcript_51704.p2 ORF type:complete len:338 (+),score=66.45 R_Transcript_51704:1531-2544(+)
MKIAAVNLKQITTICFIWDTVAHEVSTQAGVSRDEMNAARQVKFKDQVSSSEVYGVAAEGHHNERENAGTWGLGTSPYSHTLEDPNSSYPYLQPVPEEPSSSFSEAADDDPLPAIEGLQISGEAYPGRELQACGYSINGTTSCNFEWVRHYEDGSVKYIDGAKQPIYLVTADDVEHYLAIEVQPLDDRKRKGALVRVFANENRKITCDPAMQNYIEQTLRNGHASYKVSISTGYLDIWEPATLTIKREGYSIKGSGSSGVTINEKFSSGTTVNITYGHDVEFSISNASGVLHLLRAENYMEDIASFRDAIVLTLRLFIMKASQNGKGKKKRVKLFSK*

Click here to download the sequence:
Link to NCBI Protein BLAST