Transcript Information: R_Transcript_51754.p1


Annotated TAIR IDAT1G69640.1
Annotated Gene Namesphingoid base hydroxylase 1
Annotated Gene Symbol(s)SBH1
Annotation TypeOrtholog
Chromosome Positionchr1:26193933-26195466 | Reverse length=260
E-Value6.3E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.373649695382
Replicate 234.187284692708
Replicate 337.468269674004
Condition 2: 8 Hour
Replicate 132.040983127994
Replicate 243.724252224772
Replicate 345.750156136143
Condition 3: 24 Hour
Replicate 127.651782683183
Replicate 228.860413120755
Replicate 332.221305040934


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51754.p1 GENE.R_Transcript_51754~~R_Transcript_51754.p1 ORF type:complete len:269 (+),score=33.28,FA_hydroxylase|PF04116.9|2.9e+03,FA_hydroxylase|PF04116.9|9.9e-25 R_Transcript_51754:35-841(+)
ATGAAGATGGATTTTATGGTGATGATGGGTGGTAAAAAAATGGAGATATCAGATGAGATGTTAGGAACATTTGCACCAATAGTGGTGTATTGGGCATATTCAGGGATTTATATGATGCTGGGGAGTTTGGATAATTATAGGTTACATTCTAGAAAAGATGAAGATGAGAAGAATGTTGTTTCTAAATTCCAAGTTGTTAAGGGTGTTCTTCTTCAACAAGCTTTTCAAGCTATTGTTGCTATGATCCTTTTTGCTGTGACAGGATCAAGTCAGGCTGCAGATGACAAGAACACTTCCTTATTTGTTCTAGGTTGTCAATTTATTACCGCCATGATGGTTTTGGACACCTGGCAGTATTTCATGCATCGGTACATGCATCATAACAAATTCCTCTACCGCCATATTCATTCCCAGCATCACCGGCTTGTTGTCCCTTATGCCTTTGGTGCTCTTTACAACCATCCTTTGGAGGGAATTATCCTTGATACGGCTGGTGGCGCTCTAGCGTTTCTTGTTTCTGGTATGTCACCACGGACCTCAATTTTCTTCTTTACTTTTGCAACCATCAAGACGGTGGATGATCATTGCGGCCTATGGCTACCTGGGAACCTCTTTCATATCTTCTTCAAAAACAATACCGCATATCATGATGTGCATCACCAGCTTTACGGTAGCAAATACAACTTCTCACAGCCCTTCTTTGTGATGTGGGACCGAATCCTCGGAACCTACATGCCTTACTCACTCGAACCAAGAGAAGGTGGCGGGTTTGAGGCAAGACCTACGCGGGAGTGTAAGGTTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51754.p1 GENE.R_Transcript_51754~~R_Transcript_51754.p1 ORF type:complete len:269 (+),score=33.28,FA_hydroxylase|PF04116.9|2.9e+03,FA_hydroxylase|PF04116.9|9.9e-25 R_Transcript_51754:35-841(+)
MKMDFMVMMGGKKMEISDEMLGTFAPIVVYWAYSGIYMMLGSLDNYRLHSRKDEDEKNVVSKFQVVKGVLLQQAFQAIVAMILFAVTGSSQAADDKNTSLFVLGCQFITAMMVLDTWQYFMHRYMHHNKFLYRHIHSQHHRLVVPYAFGALYNHPLEGIILDTAGGALAFLVSGMSPRTSIFFFTFATIKTVDDHCGLWLPGNLFHIFFKNNTAYHDVHHQLYGSKYNFSQPFFVMWDRILGTYMPYSLEPREGGGFEARPTRECKVD*

Click here to download the sequence:
Link to NCBI Protein BLAST