Transcript Information: R_Transcript_5177.p1


Annotated TAIR IDAT3G50700.1
Annotated Gene Nameindeterminate(ID)-domain 2
Annotated Gene Symbol(s)AtIDD2, IDD2
Annotation TypeOrtholog
Chromosome Positionchr3:18840945-18842829 | Forward length=452
E-Value2.9E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6364428484027
Replicate 23.9421625271417
Replicate 35.6098132888537
Condition 2: 8 Hour
Replicate 14.5473749187741
Replicate 24.6547141791856
Replicate 37.4458647646894
Condition 3: 24 Hour
Replicate 19.5110915657631
Replicate 25.6263415537187
Replicate 37.8617061732529


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5177.p1 GENE.R_Transcript_5177~~R_Transcript_5177.p1 ORF type:complete len:490 (+),score=85.72,zf-C2H2|PF00096.22|0.0019,zf-C2H2|PF00096.22|0.23,zf-C2H2|PF00096.22|1.2,zf-C2H2_jaz|PF12171.4|0.00023,zf-C2H2_jaz|PF12171.4|13,zf-C2H2_jaz|PF12171.4|2.2e+03 R_Transcript_5177:345-1814(+)
ATGATGGCACAAGTAGAGAATTCGTTGTCAACAGCAAGTACACTATCTTACAACTCTACTAATGGAAATGGAAATCCTTCAGCAGTAGTAGAACAAGAAACAGACCAGCAACAACAACCACCACCACCAGCAAAAAAGAAGCGGAACCAGCCTGGTATGCCTGATCCGGAGGCGGAGGTGGTGGCGTTATCGCCAAAGACGTTGATGGCGACGAACAGATTTGTTTGTGAGATCTGCGGAAAAGGGTTTCAAAGAGACCAGAACCTGCAGCTACACAGGCGAGGCCACAACCTGCCTTGGAAGCTCCGTCAAAGAGGCCCTAAAGAGGCTGTCAAAAAGCGGGTCTACGTTTGTCCAGAGACGAGCTGCGTTCACCATGACCCTCGCCGTGCTCTGGGTGACCTAACTGGGATTAAAAAGCACTTTTGTCGTAAGCACGGCGAGAAGAAGTGGAAGTGTGATCGATGTTCCAAGAAGTACGCCGTTCAGTCTGATTGGAAGGCTCACCTTAAGACTTGCGGCACTCGCGAGTATAAGTGTGATTGTGGCACCATTTTTTCCAGGAGGGATAGCTTTGTGACGCATAGGGCGTTTTGCGACGCTTTGGCGCAAGAGAGTGCGAAAGTGGTGCAGACGTTGAGTGTACCGTCACCTCCAGCAACTACTACCACGTCTAGTGCGGTTCTATCTCCTGTTATGTCCATAAGCCACAGCTCAGAGATGCAAGAGAATACAATCGGGGCCACGACAAGCAGAAGTTCTGCTGGTTGCAGCACTAGTTCTACCAGCAATTTCAATGGGAATGGGAATGGCAACTTAGTTGTGTTTGACAGTAGCATGTTTGCTCCTTTATCTGGACTGTCAGTTTCACCATCTATTTCACAACCCCAATCGTCATTTTCTAGCCTAGTAACGAATGTGCCAATTAACTCAGACCACTCCAACAAACCAGCCCTTTCGCTCTCTCCTCTTTACCAGTTCTCAGCAAATGCAGCTCCAGTGCAACAACAGGCGCCTACCATGTCTGCAACTGCATTACTCCAAAAAGCTGCTCAAATGGGTGCTGCTGCTGCTGGTTCTTCGTTACTTTGTGGTGGGTTTGGTTTGGCGGTATCATCATCATCTTCACCTCCGGAACAGGTTAAGCCAGAGAATGGTAGTCCTAGTCCTTGTCGAGGCGCTGGTGATGAGCAGATCGGACTTGGGATTCCTTCTGGTTCTGATGGGTCAGGTTTGATGATGATGGGTGATCCGTCTGGTTTTTTTGGGTCTAAACCGATGACACTGGATCTTCTAGGATTGGGGATTGGTCCTGAGGGCTCATCAGCTGGTGCCTTGCCTTCCTATCTCACCTCCATGGCTGGTGGTCCTCTTGATGATGCCACAGCCTTCACAGCAGGAAGTAGTAGTAATTCAGAGTTGAAGGGTTCTTGGGATTGGGATGTTCAAGCTGCCCCAGATAAAGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5177.p1 GENE.R_Transcript_5177~~R_Transcript_5177.p1 ORF type:complete len:490 (+),score=85.72,zf-C2H2|PF00096.22|0.0019,zf-C2H2|PF00096.22|0.23,zf-C2H2|PF00096.22|1.2,zf-C2H2_jaz|PF12171.4|0.00023,zf-C2H2_jaz|PF12171.4|13,zf-C2H2_jaz|PF12171.4|2.2e+03 R_Transcript_5177:345-1814(+)
MMAQVENSLSTASTLSYNSTNGNGNPSAVVEQETDQQQQPPPPAKKKRNQPGMPDPEAEVVALSPKTLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRGPKEAVKKRVYVCPETSCVHHDPRRALGDLTGIKKHFCRKHGEKKWKCDRCSKKYAVQSDWKAHLKTCGTREYKCDCGTIFSRRDSFVTHRAFCDALAQESAKVVQTLSVPSPPATTTTSSAVLSPVMSISHSSEMQENTIGATTSRSSAGCSTSSTSNFNGNGNGNLVVFDSSMFAPLSGLSVSPSISQPQSSFSSLVTNVPINSDHSNKPALSLSPLYQFSANAAPVQQQAPTMSATALLQKAAQMGAAAAGSSLLCGGFGLAVSSSSSPPEQVKPENGSPSPCRGAGDEQIGLGIPSGSDGSGLMMMGDPSGFFGSKPMTLDLLGLGIGPEGSSAGALPSYLTSMAGGPLDDATAFTAGSSSNSELKGSWDWDVQAAPDKA*

Click here to download the sequence:
Link to NCBI Protein BLAST