Transcript Information: R_Transcript_51809.p2


Annotated TAIR IDAT3G53440.1
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19810936-19812474 | Forward length=512
E-Value1.2E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0576588080571
Replicate 23.4310117909404
Replicate 34.923117671642
Condition 2: 8 Hour
Replicate 14.0882261190782
Replicate 26.0370409233751
Replicate 37.7055682740186
Condition 3: 24 Hour
Replicate 17.4215291570909
Replicate 25.7194809911621
Replicate 37.2311066994013


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51809.p2 GENE.R_Transcript_51809~~R_Transcript_51809.p2 ORF type:complete len:563 (+),score=119.69 R_Transcript_51809:432-2120(+)
ATGCCTGAGAGAAGCTTAATGCTCAAACTTGCCCAACCTACACCTCTCAGAAGATCCCCTCGGTTCCTCCATCTCCAAAATACTCCTCCTAAACCTACGACCCCGAATCCCATTCTCAGGGTTCACCCCATTTCTAACATTTCTCCTCTCACTCCTTCAGAACCCAACTCTAGGTCTAGATACAAGCGTCTAGTTAACTTTCCTAAGAAATGTGATAATGGGCCACAAGGTTGCAAGAAATCATCAACTGGGTCAAGAAAGGCATCAAGATTCAGGGGCAAATCCAAGCTGAATCTTTCTGATTCTTCCATCTGTATTTCTCCTAAAAAGGGTTTGGAGAAATCTGACGCTGGTGGGTCCGGTAATTGTGGTGGGAAATCAGCAAACGGGTCAAGGAGAGCATCAACATTGAACAGCAGGTTCGAGGGTCTTCGACGATCTCCAAGATTCCGTAATGAGGTCAACTCTTTAGTAGTTGTTGATATGACTTGTAAAGGGAACTCCGATAGGAGGATTACTCGTAGCGCAGCTAAACGTATGGGAGTAGGAACTGATTTGTGGGAACAATCTGCCGAGAGGCGAAGCACTCGTGCTTTGTGTAGAAATGTTGCAGGGAAGTCAGAGTCCAAGAACCCAAAGAAACAGAAACAAGAAGCTAGTGATGAGGCCCGAAAGAGGGTATCCCGTAGTTCAGTTGCGCCTTTATCAATTAGGATAGAAGAAGAGGTGGGGCTAAAAGACATTGATGAGAAGAAGAAAGAATGCAATGATGTTTGTAAAGACTCGAGATTGATTGGAATTAAGAGGGCAAGAAAGCAAGCAAGGGTTCAAGGGACGGACCAAGGGTGGACTATGGAACAACAAGCCGCTTTGCAAAGAGCTTACTTTGCTGCTAAACCAAGTCCACATTTTTGGAAAAATGTCGCTAAACTGGTTCCTGGAAAATCTGCTCAAGAATGCTTTGATAAAGTACATTCAGATAATCAGACTCCTCTCTCAACTCGGCCTTCTTCGAGGGCTAAAAGATGGAAATCACCATCTAATTCACCATTATCTGGCAGCAAGCTGTTTCAATCTGCTGAAAAGGGCAAGAAGAGGGGCAGGAGTAAATGGAAGAGCAATGTAGCACGTAAAACTGCAAGACATCTACTGCAGAAGCATTGTCATGTAAATCAGGATACTGCAGCTGATTTGTTTTCTCTTCTTGAGCCGACAGTGAATCCCTCAGCTGAAGCTTTTCAGCTGAATGCAGCGCAGTCAACCCCACAACACCTATTGGGAAGCCCAGGATCATCCTCAAAGTGTCGTGAAAGATCTTCTTCAAACCATAAGAGTCGTGTTTCTAGGCTCAGTGGTGCTCGTGACAGCCTCCTTACAAGTCCACCTGTCCTAAAGAAGGTAAAGAACATAGCTTTACACGAGAAGTATCTAGATCAGCTACATACGAGGGAGGCGAAGAGGAAGTGGGCCTCTAAGCGCTGTTTGAATTCGGTTCTCTGCCAAAAGGATGGAGAAGAGAACCCTGCTGTGATGAAGGATGTCATCAAAGCTGCCAAAGAGGCCCTAATTTCCGATGCAAAGGATGTTATGAGCCAATTCCGGCATTCACAAGCCAACATTATGGGGGGATTTTCTGACTCTGAGGAAGGTTTGAATAGTGATGATGAGGAAGATGGAATTGTAGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51809.p2 GENE.R_Transcript_51809~~R_Transcript_51809.p2 ORF type:complete len:563 (+),score=119.69 R_Transcript_51809:432-2120(+)
MPERSLMLKLAQPTPLRRSPRFLHLQNTPPKPTTPNPILRVHPISNISPLTPSEPNSRSRYKRLVNFPKKCDNGPQGCKKSSTGSRKASRFRGKSKLNLSDSSICISPKKGLEKSDAGGSGNCGGKSANGSRRASTLNSRFEGLRRSPRFRNEVNSLVVVDMTCKGNSDRRITRSAAKRMGVGTDLWEQSAERRSTRALCRNVAGKSESKNPKKQKQEASDEARKRVSRSSVAPLSIRIEEEVGLKDIDEKKKECNDVCKDSRLIGIKRARKQARVQGTDQGWTMEQQAALQRAYFAAKPSPHFWKNVAKLVPGKSAQECFDKVHSDNQTPLSTRPSSRAKRWKSPSNSPLSGSKLFQSAEKGKKRGRSKWKSNVARKTARHLLQKHCHVNQDTAADLFSLLEPTVNPSAEAFQLNAAQSTPQHLLGSPGSSSKCRERSSSNHKSRVSRLSGARDSLLTSPPVLKKVKNIALHEKYLDQLHTREAKRKWASKRCLNSVLCQKDGEENPAVMKDVIKAAKEALISDAKDVMSQFRHSQANIMGGFSDSEEGLNSDDEEDGIVV*

Click here to download the sequence:
Link to NCBI Protein BLAST