Transcript Information: R_Transcript_51810.p1


Annotated TAIR IDAT5G10560.1
Annotated Gene NameGlycosyl hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3336335-3339351 | Reverse length=792
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8307239260534
Replicate 23.9286757904102
Replicate 34.6835337092505
Condition 2: 8 Hour
Replicate 13.9747810509159
Replicate 24.7935967267969
Replicate 35.0833506817936
Condition 3: 24 Hour
Replicate 15.0353554886043
Replicate 24.9467185367962
Replicate 35.0989944004172


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51810.p1 GENE.R_Transcript_51810~~R_Transcript_51810.p1 ORF type:complete len:807 (+),score=144.76,Glyco_hydro_3_C|PF01915.18|1.3e-43,Glyco_hydro_3|PF00933.17|7e-37,Fn3-like|PF14310.2|7.2e+03,Fn3-like|PF14310.2|2.1e-06 R_Transcript_51810:2870-5290(+)
ATGGATCCTAAAAACAGAAGCTACTACAGCAAGCTACTCTTCTCTACCCTTCTAACACTCATTTTCTCTCTCCTTCAACTTCAATTCACAATACAATCAAGACCTGAATTCCCTTGCAATTTGTCTCATGATGCTTTCAAGTCCTACCCCTTTTGCAACACCTCACTGCCAATCTCAATCAGAGCCCAAACACTAATCTCTCTCCTTACTCTCCCTGAAAAAATCCAGTTTCTCTGTAATAACTTCACTGGCATTGACAGGTTGGCTATTCCACCATACCAGTGGTGGTCTGAATCTCTTCACGGCATCGCCACGAACGGGCCCGGAATCACCTTCTATGGGTCAGTCAAATCAGCTACCATGTTCCCACAAGTGCTTAATACAGCTGCTTCTTTTAACCGGAGTTTATGGTCTAAGGTGGCTTCTGCCATTGCTGTTGAAGGTAGGGCCATGTATAATTCTGGGCAAGCTGGTTTGACCTTTTGGGCTCCTAATATTAACATTTTTAGAGACCCCAGATGGGGTAGAGGTCAGGAGACTCCTGGGGAGGACCCCCTTCTGGTTTCGGCTTATGCCGTTGAGTATGTCAAGGGATTTCAGGGGGAGGCTTGGGGCAAGGATAGAGAAAGTAGTAGGAATAGGTATGATGATTATGGAGGGACTAGAGTGCTGAAAGAAGATGGTGGTGATGAGGGTGGTAAAGGGTTGATGTTATCTGCTTGTTGCAAGCATTTCACTGCTTATGATCTGGAAAAGTGGGGTAATTTCAGTAGATATTCCTTCAATGCTGTGGTTACTCTACAAGATATGGAGGATACCTACCAGCCACCTTTCAAGAGCTGTATTGAACAAGGTAAAGCAAGCTGCTTAATGTGTTCTTACAATAGTGTCAATGGTGTGCCTGCATGTGCAAGAGGTGATCTCTTACAGAAAGCTCGAAAAGACTGGGGATTCGACGGGTATGTCACCTCAGATTGTGATGCAGTGGCAACAATTTCCGAATACCAATTCTATGTTAAAACTCCAGAGGACGCAGTTGCTGCTGCTCTTAAAGCAGGAGTGGATATCAATTGTGGAACATACATGCTTCGTAATGCAGCATCTGCAATTGAAAAAGGAAAGCTTCGGGAGGAAGACATTGACCATGCTTTTCAAAACCTGCTTACAGTCCTGTTCCGTCTGGGCCTTTTTGATGGAGACCCTTCAAAAGGGACATTTGGAAGATTGGGAAATCGAGATATCTGTACAAAAGAGCACCAGAGACTGGCACTGGAAGCAGCAAGACAAGGCATTGTTCTTCTTAAAAATGATAAAATGTTCCTACCTTTAAGCAAGGATGACATATCTTCAGTAGCTATCATTGGACCTGGGGCAAATTCTTCAAGTCAATTATTGGGTGGATATTCAGGAGTACCATGCAATGAAAAGAGCTATGTCGTGGGTATAGAGACATATATCAAGAAGGCAAGGTATGTTGGCGGGTGCATAGATGTAGCTTGTGAGTCCAATTCAACATTTGATGAAGCACTCATAGCTGCAGAATCATCTGATCATGTCATCTTAATTGTTGGACTGGACCTGACTCAAGAAACCGAAGATAAAGACCGAGTTGGTCTTCTACTTCCTGGCAAACAGATGGACCTTGTATCTTCTGTAGCTGCTGTTAGCAGAAAGCCCATAATATTAGTCCTCACTGGTGGTGGCCCCCTGGATGTATCTTTTGCTGAAATAGACCCACGAATCGCTAGCATTCTCTGGGTTGGGTATCCTGGTGAGGCTGGTGGCAAAGCACTAGCACAAGTTATCTTCGGAGATTATAATCCAGGTGGGAGACTGCCAATGACTTGGTATCCTGAATCATTCACCAAGATACCCATGAATGATATGAACATGCGGCCTGATCCTTCTCGACTATATCCTGGAAGGACCCATAGGTTTTATACTGGAAGGGTTGTGTATGGCTTCGGACATGGCTTAAGTTACACAAATTACACTTACAAGCTTTTATCAGTGCCGGGTAATATAAATTTGCTCAGGGTTATGAAATCAGGTGCTAGGGAGAGAAAATTATCTCAAACAGATGTTAAGTTTGATTATATCGCTACTGATAAGCTTCTGTCTTGTGATATGCTGAAGTTCACTGTGCGAATATCTGTAATGAATGTTGGGGACATCGATGGGAGTCATGTTGTGATGCTATACTCGAGGGCAGCTATGGCTATGGAAGGTGCACCAAGAAAGCAGCTTGTTGGATTTAGCCGTGTGCATACTACAGCACATGGATCGACAGAAACAAGAATCATAGTTGACCCCTGTGAACATCTTTGTTTTGCTGATAAGCATGGAAAACGGATTCTGCCTCTTGGAGAGCATATCCTAACAATAGAGGAACTGGAGCATTCCTTGTTTATGGAGATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51810.p1 GENE.R_Transcript_51810~~R_Transcript_51810.p1 ORF type:complete len:807 (+),score=144.76,Glyco_hydro_3_C|PF01915.18|1.3e-43,Glyco_hydro_3|PF00933.17|7e-37,Fn3-like|PF14310.2|7.2e+03,Fn3-like|PF14310.2|2.1e-06 R_Transcript_51810:2870-5290(+)
MDPKNRSYYSKLLFSTLLTLIFSLLQLQFTIQSRPEFPCNLSHDAFKSYPFCNTSLPISIRAQTLISLLTLPEKIQFLCNNFTGIDRLAIPPYQWWSESLHGIATNGPGITFYGSVKSATMFPQVLNTAASFNRSLWSKVASAIAVEGRAMYNSGQAGLTFWAPNINIFRDPRWGRGQETPGEDPLLVSAYAVEYVKGFQGEAWGKDRESSRNRYDDYGGTRVLKEDGGDEGGKGLMLSACCKHFTAYDLEKWGNFSRYSFNAVVTLQDMEDTYQPPFKSCIEQGKASCLMCSYNSVNGVPACARGDLLQKARKDWGFDGYVTSDCDAVATISEYQFYVKTPEDAVAAALKAGVDINCGTYMLRNAASAIEKGKLREEDIDHAFQNLLTVLFRLGLFDGDPSKGTFGRLGNRDICTKEHQRLALEAARQGIVLLKNDKMFLPLSKDDISSVAIIGPGANSSSQLLGGYSGVPCNEKSYVVGIETYIKKARYVGGCIDVACESNSTFDEALIAAESSDHVILIVGLDLTQETEDKDRVGLLLPGKQMDLVSSVAAVSRKPIILVLTGGGPLDVSFAEIDPRIASILWVGYPGEAGGKALAQVIFGDYNPGGRLPMTWYPESFTKIPMNDMNMRPDPSRLYPGRTHRFYTGRVVYGFGHGLSYTNYTYKLLSVPGNINLLRVMKSGARERKLSQTDVKFDYIATDKLLSCDMLKFTVRISVMNVGDIDGSHVVMLYSRAAMAMEGAPRKQLVGFSRVHTTAHGSTETRIIVDPCEHLCFADKHGKRILPLGEHILTIEELEHSLFMEM*

Click here to download the sequence:
Link to NCBI Protein BLAST