Transcript Information: R_Transcript_51833.p1


Annotated TAIR IDAT2G42040.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17543282-17545063 | Forward length=269
E-Value2.6E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0488017398154
Replicate 22.0353556526003
Replicate 31.4024533222134
Condition 2: 8 Hour
Replicate 12.8733412948298
Replicate 22.1676365050129
Replicate 31.2965436157419
Condition 3: 24 Hour
Replicate 12.6940283991694
Replicate 22.0254829593387
Replicate 31.1167196268825


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51833.p1 GENE.R_Transcript_51833~~R_Transcript_51833.p1 ORF type:5prime_partial len:196 (+),score=49.83,WRC|PF08879.6|6.9e+03,WRC|PF08879.6|4.3e-16,WRC|PF08879.6|7.6e+02 R_Transcript_51833:2-589(+)
AAGAATAAGGATTGTGGTGAAACGAATAATCTGTGTGTCATTGGTGTAAGCCATGACGACAACAGCAACAACAACTCGAGTACGAAGAAGGGGGTCGGGAGCAAGAGGGGAAACACAATCATGGAAGGGTCGAGGTGCAGTCGAGTGAACGGGAGAGGGTGGAGATGCTGCCAGCCTACACTGGTGGGGTACTCGCTTTGCGAGCACCACCTTGGTAAAGGGCGGATGAGGAGCATGACCACCGTTCGAGGCCGGCCATTGGCATTGAAAAAAGCTCCTCCTCCACCACCACCACCAGCACCACCGCAGGCTGGTGAGATGGCGGCCAAGAAAAGGGATGAGATTGACCATGAGGATGAGGTGGTCAAGCCAATGACTGGTGGTACTGTGAGCTCAATTGGGAAAAGGGTCAAACTTGGTGTGGTCAAAGCTCGTTCTCTTAGTAGCTTGTTGGGGCAAACAACAAACTTTACTAGTTGCAACAACAATGATGGTCATATTGGATTCGATGTCAATAATATACATCAACAACAAGGTAGCATCAATATGCATGATGAAAATAATGGTATGGTCAAGGAAGAAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51833.p1 GENE.R_Transcript_51833~~R_Transcript_51833.p1 ORF type:5prime_partial len:196 (+),score=49.83,WRC|PF08879.6|6.9e+03,WRC|PF08879.6|4.3e-16,WRC|PF08879.6|7.6e+02 R_Transcript_51833:2-589(+)
KNKDCGETNNLCVIGVSHDDNSNNNSSTKKGVGSKRGNTIMEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRMRSMTTVRGRPLALKKAPPPPPPPAPPQAGEMAAKKRDEIDHEDEVVKPMTGGTVSSIGKRVKLGVVKARSLSSLLGQTTNFTSCNNNDGHIGFDVNNIHQQQGSINMHDENNGMVKEEA*

Click here to download the sequence:
Link to NCBI Protein BLAST