Transcript Information: R_Transcript_51836.p1


Annotated TAIR IDAT3G20840.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)PLT1
Annotation TypeOrtholog
Chromosome Positionchr3:7300764-7303370 | Forward length=574
E-Value1.9E-185
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5157616351614
Replicate 27.6621570239571
Replicate 37.5993916195766
Condition 2: 8 Hour
Replicate 112.068862343666
Replicate 210.7565379473
Replicate 311.054416894406
Condition 3: 24 Hour
Replicate 112.566951349762
Replicate 211.44573861857
Replicate 313.122249492382


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51836.p1 GENE.R_Transcript_51836~~R_Transcript_51836.p1 ORF type:5prime_partial len:422 (+),score=89.02,AP2|PF00847.16|3.2e-11,AP2|PF00847.16|9.7e-10,AP2|PF00847.16|7.8e+03 R_Transcript_51836:2-1267(+)
TTTGGCCAAAGGACTTCCATCTATAGAGGTGTCACTAGGCATAGATGGACAGGAAGGTATGAAGCACATCTATGGGATAATAGTTGTAGAAGGGAAGGACAGTCAAGGAAGGGTCGACAAGTGTATCTTGGAGGGTATGATAAGGAAGAGAAAGCTGCCAGGGCTTATGATCTAGCTGCCATCAAGTACTGGGGAACTTCAACTACCACTAATTTTCCAATAAGCAACTACGAAAAAGAAATCGAAGAGATGAAACACATGACAAGACAAGAGTTTGTAGCTGCTATTAGAAGGAAGAGTAGTGGATTCTCTAGGGGTGCATCCATTTATCGTGGTGTGACAAGACACCACCAACATGGAAGATGGCAAGCTAGGATTGGAAGGGTAGCGGGAAACAAGGATCTCTACTTGGGAACATTCAGCACTGAAGAAGAAGCGGCGGAAGCATATGACATAGCAGCCATAAAGTTTAGAGGCCTAAATGCAGTGACCAACTTCGACATGAGCCGGTACGACGTGAAGGCGATCCTAGAGAGCAACACACTTCCTATAGGAGGAGGAGCAGCCAAGAGGCTTAAGGAAGCCCAAGCAATAGAATCTTCTAGAAAGAGGGAAGAAATGATTGCCCTAACCAATAGCACCTTCCAATATGGTGGCGGCAGTTCGAGTTCAACCAGGTATGGTGGGTCACACCATCACCACCACCACCAATCAACTGCTTATCCTTTGCTTCCATATCACCACCATCAAGAGCAACAACCTCAACCTTTGCTAACCCTACAAAATAACCATGGTCAAGATAACAACAATATTTCTTTGTCTCATTACTCATCACAAGAAGCTCAGTTCCTACAGTTATACCAACAACAACAACAACAACAACAGCAGCAACAGCAATCAAGTTACTCATCAAACCCTAGCATGTACAACAATTATCTTCAGTCTAACCCAGCTTTGCTACATGGGCTTATGAGTATGGGCTCCACAGATAATGGGAGTTCTAGTGGGAGTTATAGTGGCGGTGGCTACAATTTGGGAAGTGGTGGTGGGCCCGGGATTAATGGGATGGGGTCCACCTCCACGACGACCAATGCCGTGGGGCCCAGTGATCATGAGCCCCTTGCTTTGGTGAAGGTTGACTATGACATGCCATCGGCCGCCGGCGGTGGCAGTGGAGGTGCTGCTGGTGGTGGTTATGGTGGTTGGTCTACAGATTCAGTCCAAGGCCCTAACACTGGGGTTTTTGCTATGTGGAATGACTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51836.p1 GENE.R_Transcript_51836~~R_Transcript_51836.p1 ORF type:5prime_partial len:422 (+),score=89.02,AP2|PF00847.16|3.2e-11,AP2|PF00847.16|9.7e-10,AP2|PF00847.16|7.8e+03 R_Transcript_51836:2-1267(+)
FGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAAIKYWGTSTTTNFPISNYEKEIEEMKHMTRQEFVAAIRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQAIESSRKREEMIALTNSTFQYGGGSSSSTRYGGSHHHHHHQSTAYPLLPYHHHQEQQPQPLLTLQNNHGQDNNNISLSHYSSQEAQFLQLYQQQQQQQQQQQQSSYSSNPSMYNNYLQSNPALLHGLMSMGSTDNGSSSGSYSGGGYNLGSGGGPGINGMGSTSTTTNAVGPSDHEPLALVKVDYDMPSAAGGGSGGAAGGGYGGWSTDSVQGPNTGVFAMWNDS*

Click here to download the sequence:
Link to NCBI Protein BLAST