Transcript Information: R_Transcript_51848.p1


Annotated TAIR IDAT1G52360.2
Annotated Gene NameCoatomer, beta' subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19499420-19505397 | Forward length=970
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 192.199324561036
Replicate 262.828798740273
Replicate 372.737625373403
Condition 2: 8 Hour
Replicate 161.508065978592
Replicate 265.401925646605
Replicate 394.336965435584
Condition 3: 24 Hour
Replicate 1110.23748830035
Replicate 299.945399765579
Replicate 3102.64332099901


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51848.p1 GENE.R_Transcript_51848~~R_Transcript_51848.p1 ORF type:complete len:918 (+),score=190.26,Coatomer_WDAD|PF04053.10|7.4e-167,WD40|PF00400.28|3.5,WD40|PF00400.28|52,WD40|PF00400.28|0.00021,WD40|PF00400.28|0.00037,WD40|PF00400.28|5.9e-06,WD40|PF00400.28|1.1e-06,WD40|PF00400.28|1.2e+04,WD40|PF00400.28|5.1e+02,WD40|PF00400.28|1.2e+04 R_Transcript_51848:264-3017(+)
ATGCCTCTCCGACTCGAGATCAAGAGGAAACTCGCTCAGAGATCAGAGAGAGTCAAGTCTGTGGATCTACATCCTACTGAGCCATGGATTTTAGCAAGTCTGTATTCAGGAACTGTGGTTATCTGGAACTACCAGTCCCAGACAATGGCAAAGTCTTTTGAAGTTTCTGAGCTTCCAGTCAGGTCTGCCAAGTTTATTGCACGGAAACAATGGGTTGTCGCTGGAGCAGATGATATGTTTATCCGCGTCTACAACTACAACACAATGGATAAGGTTAAAGTATTTGAGGCTCACACAGATTATATCAGATGTGTAGCTGTGCATCCTACACTTCCTTATGTGTTGTCATCATCTGATGACATGCTCATCAAACTTTGGGATTGGGATAAGGGTTGGGTTTGCACTCAAATTTTTGAAGGGCACTCCCACTATGTGATGCAAGTGACGTTTAACCCTAAAGATACAAACACATTTGCTAGTGCATCCCTTGACCGCACTATAAAGATCTGGAATCTTGGCTCGCCTGATCCCAACTTTACATTGGATGCCCATTTGAAAGGGGTAAACTGTGTTGATTATTTCACGGGTGGTGACAAGCCTTACCTGATAACTGGTTCTGATGATCATACAGCAAAGGTATGGGATTATCAGACAAAAAGCTGTGTTCAGACATTGGAAGGGCACACGCACAATGTTTCTGCTGTCTGTTTCCATCCTGAACTTCCCATCATTATAACTGGCTCTGAGGATGGAACAGTTCGCATATGGCATTCAACTACTTACAGGCTTGAGAATACCCTTAATTATGGGCTTGAAAGAGTTTGGGCTATTGGATACATGAAGAGTTCCCGTCGTGTTGTAATCGGTTATGATGAAGGAACCATTATGGTGAAGATTGGCCGTGAAATCCCTGTTGCTAGCATGGACAATAGTGGTAAAATAATATGGGCCAAGCATAACGAAATTCAGACTGGTGATATCAGACGTGTTGGTGCTGGTTATGAGGTAACGGACGGGGAGAGGTTACCATTAGCAGTTAAGGAGTTGGGTACATGTGATCTTTACCCACAGTACTTAAAGCACAACCCAAATGGAAGGTTTGTTGTGGTCTGTGGAGATGGAGAATACATTATTTATACAGCAGTAGCTTGGAGAAATAGGTCATTTGGTTCAGCATTGGAGTTTGTTTGGTCATCTGAAGGAGAATATGCTGTTAGAGAAAGCACTTCCAAGATCAAGATATTTAGCAAAAATTTCCAGGAAAAGAAGAGCATCAGACCAACTTTCTCTGCTGAGCGTATATATGGTGGAATATTGCTGGCCATGTGTTCTAATGATTTTATTTGCTTCTATGATTGGGCCGACTGCAGATTGATCCATAGAATTGATGTTACCGTTAAAAATCTTTACTGGGCTGATAGTGGTGATTTGGTGGCAATTGCCAGCGACAGTTCATTTTACATCCTGAAATACAATCGTGACAAGGTTTCCGCCTATCTGGATAGTGGAAGGCCAGTTGATGAGCATGGTGTGGAGGATGCTTTTGAGCTTCTGTATGAAACAAGTGAACGTGTGAGAACAGGAATATGGGTTGGAGATTGCTTCATTTACAACAACTCTTCCTGGAGGCTGAATTACTGTGTTGGTGGCGAGGTTACCACAATGTTCCACTTAGACCGGCCAATGTATCTCCTGGGCTACCTTGCCAGTCAAAGTCGGGTGTATCTTATTGACAAGGAATTCAATGTGATGGGATACACATTGCTCCTTAGCCTTATTGAATACAAGACTCTCGTGATGCGTGGGGACTTTGAGCGTGCTAATGAAATATTACCTACAATTCCAAAGGAACACCATAACAGTGTGGCTCGGTTCCTTGAATCACGAGGAATGATAGAGGAGGCTCTTGAAGTAGCGACTGATCCTGACTATAGGTTTGAGCTTGCCATACAGCTAGGCAGATTAGAGGTTGCAAAGGAGATAGCTACTGAGGTCCATAGTGAGGCCAAGTGGAAGCAGTTGGGAGAGCTGGCCATGTCCACTGGAAAGTTCGAAATGGCTGAAGAATGCCTCAAGCATGCAATGGATTTCAGTGGCATGTTGCTGCTTTACTCTTCAATTGGAGATGCTGAGGGAATCTCAAAACTTGCAACCCTGGCTAAAGAGCAAGGAAAGAACAATGTTGCTTTCCTGTGCTTATTCACCTTGGGTAAATTGGAAGAGTGCATTCAGCTGTTGATTGATAGCAACCGAATACCTGAGGCTGCATTGATGGCACGTTCTTATCTACCCAGCAAGGTGTCAGAAATTGTTGCATTATGGAGAAAAGATCTAAGCAAGGTGAATCCAAAGGCTGCAGAATCATTGGCAGATCCTCAGGAGTATTCTAATTTGTTCGATGATTGGCAAATAGCTCTTGCCGTTGAGTCTAAAGTTGCAGAGACAAGGGGTACTTATCCTCCTGCTGAGCAGTACTTACAATTTGCTGAGAAATCGAAAACTGATCTCGTTGAAGCTTTTAAAAGCATGCAAATAGAAGAAGATCAACCACTTGAAAATGGAGAAGCAGACCACGAAGATGAGCTCACAGAAGATAATACCGTCGAAGATAATGCCGAGCAGAATGGAGCAGAAGAGACCCAGGAAGAGGCTGTTGTTGTAGATGCTGATTCTAATGACGGTGCTGTACTTGTCAATGGTAACGAGGCTGAAGAAGAGTGGGGTACGAATAATGACGGAACACCATCAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51848.p1 GENE.R_Transcript_51848~~R_Transcript_51848.p1 ORF type:complete len:918 (+),score=190.26,Coatomer_WDAD|PF04053.10|7.4e-167,WD40|PF00400.28|3.5,WD40|PF00400.28|52,WD40|PF00400.28|0.00021,WD40|PF00400.28|0.00037,WD40|PF00400.28|5.9e-06,WD40|PF00400.28|1.1e-06,WD40|PF00400.28|1.2e+04,WD40|PF00400.28|5.1e+02,WD40|PF00400.28|1.2e+04 R_Transcript_51848:264-3017(+)
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVVIWNYQSQTMAKSFEVSELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKSSRRVVIGYDEGTIMVKIGREIPVASMDNSGKIIWAKHNEIQTGDIRRVGAGYEVTDGERLPLAVKELGTCDLYPQYLKHNPNGRFVVVCGDGEYIIYTAVAWRNRSFGSALEFVWSSEGEYAVRESTSKIKIFSKNFQEKKSIRPTFSAERIYGGILLAMCSNDFICFYDWADCRLIHRIDVTVKNLYWADSGDLVAIASDSSFYILKYNRDKVSAYLDSGRPVDEHGVEDAFELLYETSERVRTGIWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDFERANEILPTIPKEHHNSVARFLESRGMIEEALEVATDPDYRFELAIQLGRLEVAKEIATEVHSEAKWKQLGELAMSTGKFEMAEECLKHAMDFSGMLLLYSSIGDAEGISKLATLAKEQGKNNVAFLCLFTLGKLEECIQLLIDSNRIPEAALMARSYLPSKVSEIVALWRKDLSKVNPKAAESLADPQEYSNLFDDWQIALAVESKVAETRGTYPPAEQYLQFAEKSKTDLVEAFKSMQIEEDQPLENGEADHEDELTEDNTVEDNAEQNGAEETQEEAVVVDADSNDGAVLVNGNEAEEEWGTNNDGTPSA*

Click here to download the sequence:
Link to NCBI Protein BLAST