Transcript Information: R_Transcript_51865.p1


Annotated TAIR IDAT4G39100.1
Annotated Gene NamePHD finger family protein / bromo-adjacent Homology (BAH) domain-containing protein
Annotated Gene Symbol(s)SHL1
Annotation TypeHomolog
Chromosome Positionchr4:18218298-18220134 | Reverse length=228
E-Value1E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.889977581425
Replicate 213.095630672021
Replicate 310.981064930114
Condition 2: 8 Hour
Replicate 110.475911291863
Replicate 214.292522413954
Replicate 311.508495393338
Condition 3: 24 Hour
Replicate 112.425617313964
Replicate 210.800255642293
Replicate 312.18490776384


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51865.p1 GENE.R_Transcript_51865~~R_Transcript_51865.p1 ORF type:complete len:194 (+),score=6.80,BAH|PF01426.14|2.4e-23,BAH|PF01426.14|3e+03 R_Transcript_51865:165-746(+)
ATGGCAAAACCCCGGGCTTCGAAACGCTCTCTCGACGCTTACGCCATTAAAGGCACCTCCAAGATCGTCAAACCTGGTGACTGCGTGTTGATGCGGCCAGCAGAGACGTCGAAGCCGTCCTACGTGGCGAGAGTGGAGAGGATAGAAGCCGACGCTCGTGGAGCGCACGTGCGAGTGCACGTGAGGTGGTATTACCGGCCGGAAGAGTCGATCGGAGGCCGCCGGCAATTTCACGGTTCTAAGGAACTCTTTCTTTCCGACCACTTTGATGTTCAGAGTGCCGATACGATTGAAGGAAAGTGTACGGTTCATAGCTTCAAGAGCTATACGAAACTAGATGCTGTCGGAAACGACGACTTCTTCTGTCGTTTCGAGTATAATTCCTCCACTGGTGCCTTCACTCCTGATCGCGTCGCCGTGTTCCATCCTGCTTGTATCGACATGACTGCAGAAGAAGCTAAAAGACTTGACCACTTCTTTTGCCAAAATTGTTCCCCTGATGATCAGAAGAAGTTGCAAAGTGCACATGCTGCTTCTAGACATTCAGATACGAAGGTGGATACAAAACGCCGTAGAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51865.p1 GENE.R_Transcript_51865~~R_Transcript_51865.p1 ORF type:complete len:194 (+),score=6.80,BAH|PF01426.14|2.4e-23,BAH|PF01426.14|3e+03 R_Transcript_51865:165-746(+)
MAKPRASKRSLDAYAIKGTSKIVKPGDCVLMRPAETSKPSYVARVERIEADARGAHVRVHVRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHSFKSYTKLDAVGNDDFFCRFEYNSSTGAFTPDRVAVFHPACIDMTAEEAKRLDHFFCQNCSPDDQKKLQSAHAASRHSDTKVDTKRRRR*

Click here to download the sequence:
Link to NCBI Protein BLAST