Transcript Information: R_Transcript_5194.p1


Annotated TAIR IDAT5G08470.1
Annotated Gene Nameperoxisome 1
Annotated Gene Symbol(s)PEX1
Annotation TypeOrtholog
Chromosome Positionchr5:2735925-2742731 | Forward length=1130
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2194511950888
Replicate 24.8197312301265
Replicate 36.7289800854133
Condition 2: 8 Hour
Replicate 16.5898633894961
Replicate 27.6896260333365
Replicate 39.1955388894836
Condition 3: 24 Hour
Replicate 18.0968167971059
Replicate 26.2072848240851
Replicate 38.0851679582206


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5194.p1 GENE.R_Transcript_5194~~R_Transcript_5194.p1 ORF type:complete len:1137 (+),score=269.91,AAA|PF00004.25|2.7e-16,AAA|PF00004.25|1.3e-38,PEX-1N|PF09262.7|1.3e-23,AAA_16|PF13191.2|0.00012,AAA_16|PF13191.2|8.9e+02,AAA_16|PF13191.2|0.0045,AAA_16|PF13191.2|2.5e+02,AAA_16|PF13191.2|3e+02,AAA_17|PF13207.2|0.0033,AAA_17|PF13207.2|0.11,AAA_25|PF13481.2|0.04,AAA_25|PF13481.2|21,AAA_25|PF13481.2|0.8,AAA_25|PF13481.2|81,AAA_22|PF13401.2|0.00057,AAA_22|PF13401.2|3,AAA_22|PF13401.2|4.1e+03,RNA_helicase|PF00910.18|0.017,RNA_helicase|PF00910.18|1.5,RNA_helicase|PF00910.18|1.2e+02,AAA_19|PF13245.2|0.0076,AAA_19|PF13245.2|0.083,IstB_IS21|PF01695.13|0.095,IstB_IS21|PF01695.13|0.021,IstB_IS21|PF01695.13|8.8e+03,AAA_5|PF07728.10|0.076,AAA_5|PF07728.10|0.055,RuvB_N|PF05496.8|0.0092,RuvB_N|PF05496.8|0.69,RuvB_N|PF05496.8|3e+03,NACHT|PF05729.8|0.021,NACHT|PF05729.8|2.1e+03,NACHT|PF05729.8|28,NACHT|PF05729.8|2.2e+02,AAA_24|PF13479.2|0.029,AAA_24|PF13479.2|0.67 R_Transcript_5194:190-3600(+)
ATGGAGGTGGAGGTAAGAGCAGTAGCAGGAACAGAGAACTGCTTCGTATCGCTCCCATTCTCTCTCCTCCAAACCCTAGAATCCACTCATCCTGGTCATCGATTACCTCATCTTCTACCTCTCGAGCTCCGTTCTCTCTCTTCTCCTCATCTCCTTTGGCATGTCGCTTGGTCTGGCTCCGCCTCTTCTTCTTCCGCCATCGAGATTGCTCAAGAATTCGCTGCATGTATTGGGCTACCTGACCGTACAATTGTTCAAGTGCGACCTCTTCCTAATGTACCGAAGGCTAGCCTTGTCACAATTGAACCTCTCACCGAAGATGATTGGGAAGTTATTGAGCTCAATGCAGAGGTAGCTGAGGCAGCTATCTTGAGTCAGGTCCGTGTTGTCCATGGGAAGATGTCTTTCCCATTGTGGTTGCATGGCCACAGAATTGTTACCTTTTCTGTTGTTTCTATGGTGCCCAACAAAACAGTAGTGCAACTTGTTCCAGGAACAGAATTGGCTGTTGCACCAAAGAGACGTAAAAAATCTGCTGATCAGCTGCAAGACTCCCATTTGGAGCCTTCTAATGGAGCTAATTCTTTGCAAAAGGCTCTTTTACGTGTTCAAGATCCAAAGAACAGTTTGATTAAGGAAAGCCATATGAGGGATGGTGTTGTGGGCATTGAGCTCTCATCTGTTGTCTTGATCCACCCGGAAACAGCTAAGAGTTTTTTATTTGATTTGCTTCAAGTGGTTGTAATAGTGCCTAAGTTGCCTTCAAAGATGAAAGTAGATTATCAAAATGATATGGTAAGAAAAGATTTTAATTCTTCTGCAAAGGAGCATAATGGGAAGGTTTTGACTGATCAGAAGGATTCTTGCTATGTTGTAGTTCATCTCTTGTTTTCAGAGTCCGTTGCTAAAGGACATCTGATGCTTTGTCAATCACTTCGCAACTATTTGAGAGTAAGCTTTCACTCATGGCTTTATGTGCAAAGATATGCTGGTGATTTGAAGAAAGATTTTCCATCCTTTTCACTTTCTCCTTGCCAATTTGTTACAATCACTGAGGATCTTCAAAACAATGCCCGAGAGATGCTTGATGACAGCCTTAAGTCAGAAGACATGCAGTCGCTTCCTCAGGTGCCTCAGTATATTGGTGCACCAGATAGGTCATCACAAGAGGAGCTTTTATCTACCCTTTCTGATGGATCCTTTGATAATATAGCAAAGGAAGTTGGTATTCCTTTGAATAGTAAGGAAAAACTAAAGGTCCTCTTTTATGCATGGCTAAAGGCTCAGTTTCACGCTATCACTTCCATAACTGGTGAAAATGTCACTTCGCTGGTGTTGGGTCCTACAACTTTCCTCCGCTTTAAATGGATTGTCAGTGATGCTGGATCTGATGGTGATAGACAACGGCAGACATTAAGAGCAGTAATTTTAGAGGATAGAAAAATGATGGCTGGTCCAATAAATGAGATCTTATATGTGCTAAATGCAGCTGCTGAGTCTTTGCTTGCTCAAAAGTATAATGCTTATGAGCTTAGGGCTGTAGGAGACGAGATGAATAGCATCCCTGATAATCTGAAGGTATTCTTTGGGAATCTGGGTCTTGGCAGTTTGATTTCCTACAACACTTGCAAAGAGCTTGTGTTCAAACAATTCTCCAGTTCAACATTCTCTTCTTTGAGTTGGATGAGTACTGCATTATCTGATGTCATTAACAGGCTAACATTGCTGTTATCTCCTGCATGTGGAACATGGTTTGGTAATTTCAACCTCCCATGTCCTGGTCATATTCTAATATATGGGCCTCCAGGTTCTGGGAAAACGTTATTAGCTTCAGCTGCAGCAAAGTCCCTTGAGGATAACAAAGATATCTTGGTCCACACTGTATTTGTACCTTGCTCTGCATTGGCGGTAGAAAAGGTCACTTCAGTGCGTCAAATACTCAGCGACTATGTCTCAGAGGCATTGTATTATGCCCCGTCTGTCATTGTATTTGATGATCTTGATAGTTTGATTGCTTCCTCTGCTGATTCAGAAGGATCTCAAATGTCTGCCTACATGGTTGCACTTATGGAATTTATCACTGGGATCATGGATGAATATGGGGAAAAGAGGAAGAAATCATGTGGCCTTGGTCCAATAGCATTTGTGGCTTGTGTTCGTACTCTTGATAGCATACCTCAGTCATTGAGAGCTTCAGGGAGATTTGACTTCCACATACAACTTCCAGCTCCATCTACCTCAGAACGTTTGGCTGTCTTGAGACACGAAATTCAGAAGCGCTCCTTAAGATGTTCAGATGATACCTTGATGGATGTAGCTTCTAAATGTGATGGATATGATGCATATGATCTGGCTATATTAGTTGATAGGAGTGTTCATGCTGCCATTAGCCGTTTTTTGCCTTCCTGTGAGTCTGTTGAAGGGGAAAAGCCGAGCTTAATTGCAGATGATTTCTCACAAGCTAGGCATGATTTCCTTCCAGTTTCAATGCGTGACATAACAAAATCAGCATCTGATGGTGGTCGTGTTGGTTGGGAAGATGTTGGTGGTTTACTTGATGTTCGAAATGCTATCAAAGAGATGATTGAACTACCTTCGAAGTTTCCAAATATTTTTGCAAAATCTCCTTTAAGGCTGCGATCAAATGTTCTATTGTATGGCCCTCCTGGCTGTGGGAAAACTCATATTGTTGGGGCTGCAGCGGCTGCTTCTTCACTCAGATTTATATCAATAAAAGGTCCTGAGCTGTTGAACAAGTATATTGGTGCATCTGAGCAAGCTGTTCGAGATGTATTCTCCAAGGCAGCAGCTGCTGCTCCATGTCTTCTCTTTTTCGACGAATTTGATTCTATTGCTCCTAAAAGAGGGCATGACAACACTGGAGTTACCGATCGCGTTGTTAATCAGTTCTTGACTGAATTAGATGGGGTTGAAGTCTTAACTGGTGTATTTGTTTTTGCAGCAACAAGTAGACCTGATTTACTTGATGCTGCTTTGTTACGACCTGGCCGACTAGACCGCCTGCTCTTTTGTGATTTTCCTGGCTTGCGTGATAGGCTGGAAATACTAAGAGTTCTTTCTACGAAGTTACCATTGGCAGATAACGTTGATTTGGATGCCATAGCGTACATGACCGATGGATTTAGTGGTGCTGATCTCCAAGCGCTTCTCTCAGATGCACAACTAGCTGCAGTTCAGGAGCTTCTTGATGCCAGATATGACAGCAAATCAGGGAAGTCACCCGTAATTACCGATGACTTATTGAAGTCTGTTGCATCAAAGGCCAAACCGTCGGTTTCTGAGTCCGAGAAGCAGAGGCTTTATTCCATTTATAATCAATTCTTGGACTCGAAAAGATCTGTTGCTGCACAGTCAAGGGATGTAAAAGGCAAGAGAGCAACGTTAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5194.p1 GENE.R_Transcript_5194~~R_Transcript_5194.p1 ORF type:complete len:1137 (+),score=269.91,AAA|PF00004.25|2.7e-16,AAA|PF00004.25|1.3e-38,PEX-1N|PF09262.7|1.3e-23,AAA_16|PF13191.2|0.00012,AAA_16|PF13191.2|8.9e+02,AAA_16|PF13191.2|0.0045,AAA_16|PF13191.2|2.5e+02,AAA_16|PF13191.2|3e+02,AAA_17|PF13207.2|0.0033,AAA_17|PF13207.2|0.11,AAA_25|PF13481.2|0.04,AAA_25|PF13481.2|21,AAA_25|PF13481.2|0.8,AAA_25|PF13481.2|81,AAA_22|PF13401.2|0.00057,AAA_22|PF13401.2|3,AAA_22|PF13401.2|4.1e+03,RNA_helicase|PF00910.18|0.017,RNA_helicase|PF00910.18|1.5,RNA_helicase|PF00910.18|1.2e+02,AAA_19|PF13245.2|0.0076,AAA_19|PF13245.2|0.083,IstB_IS21|PF01695.13|0.095,IstB_IS21|PF01695.13|0.021,IstB_IS21|PF01695.13|8.8e+03,AAA_5|PF07728.10|0.076,AAA_5|PF07728.10|0.055,RuvB_N|PF05496.8|0.0092,RuvB_N|PF05496.8|0.69,RuvB_N|PF05496.8|3e+03,NACHT|PF05729.8|0.021,NACHT|PF05729.8|2.1e+03,NACHT|PF05729.8|28,NACHT|PF05729.8|2.2e+02,AAA_24|PF13479.2|0.029,AAA_24|PF13479.2|0.67 R_Transcript_5194:190-3600(+)
MEVEVRAVAGTENCFVSLPFSLLQTLESTHPGHRLPHLLPLELRSLSSPHLLWHVAWSGSASSSSAIEIAQEFAACIGLPDRTIVQVRPLPNVPKASLVTIEPLTEDDWEVIELNAEVAEAAILSQVRVVHGKMSFPLWLHGHRIVTFSVVSMVPNKTVVQLVPGTELAVAPKRRKKSADQLQDSHLEPSNGANSLQKALLRVQDPKNSLIKESHMRDGVVGIELSSVVLIHPETAKSFLFDLLQVVVIVPKLPSKMKVDYQNDMVRKDFNSSAKEHNGKVLTDQKDSCYVVVHLLFSESVAKGHLMLCQSLRNYLRVSFHSWLYVQRYAGDLKKDFPSFSLSPCQFVTITEDLQNNAREMLDDSLKSEDMQSLPQVPQYIGAPDRSSQEELLSTLSDGSFDNIAKEVGIPLNSKEKLKVLFYAWLKAQFHAITSITGENVTSLVLGPTTFLRFKWIVSDAGSDGDRQRQTLRAVILEDRKMMAGPINEILYVLNAAAESLLAQKYNAYELRAVGDEMNSIPDNLKVFFGNLGLGSLISYNTCKELVFKQFSSSTFSSLSWMSTALSDVINRLTLLLSPACGTWFGNFNLPCPGHILIYGPPGSGKTLLASAAAKSLEDNKDILVHTVFVPCSALAVEKVTSVRQILSDYVSEALYYAPSVIVFDDLDSLIASSADSEGSQMSAYMVALMEFITGIMDEYGEKRKKSCGLGPIAFVACVRTLDSIPQSLRASGRFDFHIQLPAPSTSERLAVLRHEIQKRSLRCSDDTLMDVASKCDGYDAYDLAILVDRSVHAAISRFLPSCESVEGEKPSLIADDFSQARHDFLPVSMRDITKSASDGGRVGWEDVGGLLDVRNAIKEMIELPSKFPNIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISIKGPELLNKYIGASEQAVRDVFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPGLRDRLEILRVLSTKLPLADNVDLDAIAYMTDGFSGADLQALLSDAQLAAVQELLDARYDSKSGKSPVITDDLLKSVASKAKPSVSESEKQRLYSIYNQFLDSKRSVAAQSRDVKGKRATLA*

Click here to download the sequence:
Link to NCBI Protein BLAST