Transcript Information: R_Transcript_51946.p1


Annotated TAIR IDAT5G50410.1
Annotated Gene Nameunknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20528446-20529816 | Reverse length=259
E-Value9.1E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7773485807063
Replicate 26.2076018622099
Replicate 36.27445421112
Condition 2: 8 Hour
Replicate 16.9199183546563
Replicate 29.3332376380601
Replicate 37.9709246637351
Condition 3: 24 Hour
Replicate 18.4844070189341
Replicate 28.7262111262719
Replicate 38.2792622076525


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51946.p1 GENE.R_Transcript_51946~~R_Transcript_51946.p1 ORF type:complete len:230 (+),score=53.63 R_Transcript_51946:242-931(+)
ATGGTTGACGAGGAGGGAGTGAAAGCGGGAAACAACAATGGCGAAGAGTGGGAGACTAGGGCTAAGGAATGGCTATCAACTTTACCCAAAGATCAAGCCTTGAGCATGACCCAAGTTGAGACTTGGGTTCAATCTAATTTACCTGACTCTTTCAAAACCCTTTCTCAATCTCAACTTCTTCGCCGTTTTAGCTCTTTGCATGCCTCTCTCCATTCTCAACCTCAGGAGGTAAAGCAAGCTAATCGTGGTGAGAATCCTGCTCGTTTTCAACGAACTGATCAATGGCGTCCAGTTTATGATTGGTTAGAGTCATTGGACTTGGATGAGGTTCTCAAGTCCAAAGACATTTCTGACTGGCTGGCTGCAAATCCTGAGGTATATGATCAATTGTGCTCAAGACATTCTCGCTATCATTTGATGCACTATATAAAAAAATGCCATGTCAAGATTCTGAAGAAACGAAAGAAGCCAAATGGAGCCACTCCTGGAAAGGCTGAGCGTCGTGATGATCCAAAACTGTCAGTCACAATCCCATATGATCCCTTGAGTAATGTGCCTAAAGACTCTGACCTGTATAGAGCAAAGCGACAAGAAGCTCTGCACAAGTTTGGGATTTTAGTGGAGTTGGAGAAACAACTTTCAACCATTGTTCCAAAGGAGAAGGCAGCGGAGAACCCAAAGGAACACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51946.p1 GENE.R_Transcript_51946~~R_Transcript_51946.p1 ORF type:complete len:230 (+),score=53.63 R_Transcript_51946:242-931(+)
MVDEEGVKAGNNNGEEWETRAKEWLSTLPKDQALSMTQVETWVQSNLPDSFKTLSQSQLLRRFSSLHASLHSQPQEVKQANRGENPARFQRTDQWRPVYDWLESLDLDEVLKSKDISDWLAANPEVYDQLCSRHSRYHLMHYIKKCHVKILKKRKKPNGATPGKAERRDDPKLSVTIPYDPLSNVPKDSDLYRAKRQEALHKFGILVELEKQLSTIVPKEKAAENPKEH*

Click here to download the sequence:
Link to NCBI Protein BLAST