Transcript Information: R_Transcript_51974.p1


Annotated TAIR IDAT2G39720.1
Annotated Gene NameRING-H2 finger C2A
Annotated Gene Symbol(s)RHC2A
Annotation TypeOrtholog
Chromosome Positionchr2:16567506-16568711 | Reverse length=401
E-Value6.1E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.375158293221
Replicate 220.274068952347
Replicate 325.326859750046
Condition 2: 8 Hour
Replicate 121.778582582071
Replicate 229.118593061003
Replicate 331.620373292026
Condition 3: 24 Hour
Replicate 132.208618985305
Replicate 221.513360637738
Replicate 327.265519106282


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51974.p1 GENE.R_Transcript_51974~~R_Transcript_51974.p1 ORF type:complete len:407 (+),score=43.09,DUF1117|PF06547.8|2.3e+03,DUF1117|PF06547.8|1.4e-39,zinc_ribbon_9|PF14369.2|4.3e-14,zinc_ribbon_9|PF14369.2|9.3e+03,zinc_ribbon_9|PF14369.2|1.9e+03,zf-RING_2|PF13639.2|2.1e+02,zf-RING_2|PF13639.2|3.5e-12,zf-rbx1|PF12678.3|1.3e-06,zf-RING_11|PF17123.1|5.5e-07,zf-RING_11|PF17123.1|1.1e+04 R_Transcript_51974:201-1421(+)
ATGTCAACAACAGCAACGACCTCGTACTGGTGCTACAGGTGCAACCGGTTCGTCAGAGTATGGTCGAGCCAACATCGTGACACTTCATCATCAATCTCATGTCCGGAATGCTACGGAGGTTTCGTGGAACAAATCGATTCCCCACCTTCCTCTCACTTTTCTGACTCAAGACGACGCCGTTTCCCAGCCGCTGCTATGTACATGGTCGGCGATCAGATCTCGTCCTCTTCGTCTTCCTCCAGCCCTCGACTCCGCCGTAGCCGCCGTAACGGTGGAGACCGCTCTCCCTTCAACCCCGTCATCGTCCTTCGTGCCCCCTCCTCCGACTCCGACGCTAACGGTAACGTGGGGGGGTATGAGTTATATTACGATGACGGTGCGGGTTCGGGGTTAAGGCCTTTGCCGGCGAGCGTTTCGGAGTTTCTATTAGGGTCTGGGTTTGACAGGTTGTTGGATCAGTTGGCCCAGATTGAGATTAATGGGCTGGGCCGAGCGGAGCAGCCCCCTGCCTCGAAGGCGGCGATTGAATCTATGCCGACAATCGAGATTGCGGAGAGTCACGTGATGACGGAGTCTCATTGTGCTGTTTGTAAGGAAGCTTTTGAGCTAGGGGCCGAAGCTAGGGAGATGCCATGTAAGCATATTTATCATCAAGATTGTATCTTGCCTTGGTTGTCCTTGCGTAATTCCTGCCCTGTTTGTCGTCACGAGTTGCCTCCTTCTGGGGGTGCTGGTGATGACTCATCACCACCTGAGGATTTTAATGAGAATAATAGTAGTAGGAGGCATCATCATGTGGTGGAGAATAGTGAGGAGGAGGCGGTGGGGTTGACGATATGGAGGTTGCCGGGAGGAGGGTTTGCGGTGGGCCGTTTTTCGGGAGGGAGGAGAGGCGGCGGCGGTGGTGGTGGAGAAAGAGAGTTGCCTGTTGTTTATACAGAAATGGATGGTGGGTTTAATCAAGGGGGCTTGCCTAGGAGGATTTCTTGGGGTTCTAGAGGTGCTAGGTCTAGGGAAACTACCGGCATTCGTCGCGCTCTCCGGAACTTGTTCGCTTGTTTTGGGGGTATGCATTCCTCTGATACGACTTCCTCGAGCTCTGATCATTCCAGGATTAATAATAATAATAATAGTCAGAGAAGTCGGTCGTTGTCCATCTTCGGCGGCTCCAGGAGGAGAAGTAGGGGTCTTGACATGGCTACTCGCATTAGTAGATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51974.p1 GENE.R_Transcript_51974~~R_Transcript_51974.p1 ORF type:complete len:407 (+),score=43.09,DUF1117|PF06547.8|2.3e+03,DUF1117|PF06547.8|1.4e-39,zinc_ribbon_9|PF14369.2|4.3e-14,zinc_ribbon_9|PF14369.2|9.3e+03,zinc_ribbon_9|PF14369.2|1.9e+03,zf-RING_2|PF13639.2|2.1e+02,zf-RING_2|PF13639.2|3.5e-12,zf-rbx1|PF12678.3|1.3e-06,zf-RING_11|PF17123.1|5.5e-07,zf-RING_11|PF17123.1|1.1e+04 R_Transcript_51974:201-1421(+)
MSTTATTSYWCYRCNRFVRVWSSQHRDTSSSISCPECYGGFVEQIDSPPSSHFSDSRRRRFPAAAMYMVGDQISSSSSSSSPRLRRSRRNGGDRSPFNPVIVLRAPSSDSDANGNVGGYELYYDDGAGSGLRPLPASVSEFLLGSGFDRLLDQLAQIEINGLGRAEQPPASKAAIESMPTIEIAESHVMTESHCAVCKEAFELGAEAREMPCKHIYHQDCILPWLSLRNSCPVCRHELPPSGGAGDDSSPPEDFNENNSSRRHHHVVENSEEEAVGLTIWRLPGGGFAVGRFSGGRRGGGGGGGERELPVVYTEMDGGFNQGGLPRRISWGSRGARSRETTGIRRALRNLFACFGGMHSSDTTSSSSDHSRINNNNNSQRSRSLSIFGGSRRRSRGLDMATRISRW*

Click here to download the sequence:
Link to NCBI Protein BLAST