Transcript Information: R_Transcript_51998.p1


Annotated TAIR IDAT1G28490.1
Annotated Gene Namesyntaxin of plants 61
Annotated Gene Symbol(s)SYP61, ATSYP61, OSM1
Annotation TypeOrtholog
Chromosome Positionchr1:10016433-10017842 | Forward length=245
E-Value6E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.824642083023
Replicate 239.736799961424
Replicate 340.891366287347
Condition 2: 8 Hour
Replicate 132.175640715801
Replicate 235.75893087826
Replicate 335.853181308037
Condition 3: 24 Hour
Replicate 142.026068602781
Replicate 235.999286205694
Replicate 338.981821157243


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_51998.p1 GENE.R_Transcript_51998~~R_Transcript_51998.p1 ORF type:complete len:242 (+),score=55.41,Syntaxin-6_N|PF09177.7|1.9e-21,Syntaxin-6_N|PF09177.7|94,SNARE|PF05739.15|4.8e-06 R_Transcript_51998:241-966(+)
ATGTCCTCCGCTCAAGATCCATTTTACATTGTTAAGGAGGAGATCCAAGATTCCATTGATAAGCTACTCTCAAGTTTTCACCAATGGGAAAATGTTGCGGATATTGGGGAGCAAGTGCGTCTCAGCAAAGAGCTTTTTTCTGGTTGTGAAAGCGTTGAGTGGCAGGTTGATGAGCTTGACAAAGCAATCTCTGTGGCTGCTAGAGACCCTGCCAAATATGGAATTGATGAAGTAGAGCTTGAAAAACGTCGGAGGTGGACCAGAACTGCACGTGATCAGGTGGGCACTGTGAAGAAAAAAGTATCAGCTGGAAAGGGGCCAAGCTATCATGATGCACACCGGGAACTTATGAGGCTTCCGATGGATCACTCGTATCATACAGAGAGGTCCAATCAATATGGGCACCATAACGATGACTTCATATCTTCAGAATCAGACAGACAATTACTTTTGATAAAGCAGCAGGATGAAGAGCTTGATGAACTGAGTGAAAGCGTTCAGAGAATCGGAAGCGTTGGGCTCACTATTCATGATGAATTGCTTTCACAGGAGAAAATCATTGATGAATTGGGTGTTGAAATGGACAGCACTTCGAATAGGCTGGATTTTCTTCAGAAAAAGGTTGCAATTGTCATGAAAAAGGCAGGAGCTAAGGGCCAGATTATGATGATTTTGTTCTTGGTTGTTCTTTTTGTTGTATTATTTGTATTAGTTTTCTTCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_51998.p1 GENE.R_Transcript_51998~~R_Transcript_51998.p1 ORF type:complete len:242 (+),score=55.41,Syntaxin-6_N|PF09177.7|1.9e-21,Syntaxin-6_N|PF09177.7|94,SNARE|PF05739.15|4.8e-06 R_Transcript_51998:241-966(+)
MSSAQDPFYIVKEEIQDSIDKLLSSFHQWENVADIGEQVRLSKELFSGCESVEWQVDELDKAISVAARDPAKYGIDEVELEKRRRWTRTARDQVGTVKKKVSAGKGPSYHDAHRELMRLPMDHSYHTERSNQYGHHNDDFISSESDRQLLLIKQQDEELDELSESVQRIGSVGLTIHDELLSQEKIIDELGVEMDSTSNRLDFLQKKVAIVMKKAGAKGQIMMILFLVVLFVVLFVLVFFN*

Click here to download the sequence:
Link to NCBI Protein BLAST