Transcript Information: R_Transcript_52028.p1


Annotated TAIR IDAT1G75400.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28297609-28299464 | Forward length=455
E-Value6.4E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.149052441314
Replicate 27.1646143600638
Replicate 39.0649885747807
Condition 2: 8 Hour
Replicate 17.5430389647912
Replicate 29.1139139257913
Replicate 313.119055069237
Condition 3: 24 Hour
Replicate 112.240537028989
Replicate 210.923102151968
Replicate 312.707316702109


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52028.p1 GENE.R_Transcript_52028~~R_Transcript_52028.p1 ORF type:complete len:422 (+),score=81.89,zf-RING_2|PF13639.2|6.3e-07,zf-RING_5|PF14634.2|1.5e+04,zf-RING_5|PF14634.2|4.3e-06 R_Transcript_52028:264-1529(+)
ATGGGATCAGCCTGCTGTGTAGCTGCAAGGGATGCACCCGTGCCCAATAGAAACAGACATGCAGAATTACAAAGAAGTGGGAGATATTCTCCATCATGGAGCTTCAGGTGGGACAATTACCGACGTGTGGCAGGTGAAATTGAGAATCCATCATGTCAAACTTGTGAAGGAATGAGCACAGATGTAAGGATCGAAATAAAAGATGGGATGGGTTCAGATAGAGGAAACATTTCAGACAGGGGGAGCCCTTTGGAGAATCTTGGTACACCTATTTCTCAAAAATCACCTTCTTATGAAGGGATCAGCACAAATTACTTGTCTCCTTCAGAGACATCTATGACAAGCAACCATTTTGTGAAGATGAACACTGTAGAACCACCAGAAATCGCAGCTGTTCCAGCGACTCTGCCATTTTCAATGCCCCCAAGCTCATCTTTCTCTATACCTGGTGAACATTTCTGTCCACAACGTAACCTTCATCCTTCCAGTGCTACACCATCAAGGCGGGCAAGGCGTTCGCCAGGACACCAGCTGTTTAGGCAGATTTCAGATAGTAAAATCTTGGGCTTGAAATCACCAAATAGCAATTCACTATCAGAAGGAAGGCCATCGTTTGTACTGTCCACTTATAGCAACGATCTGGCAGGTGGGTCTTCTGATGGATGGTCATTGCGCACATTTTCTGAACTTGTTGCTTCCTCTCAAAGAGAAAGATGGTCTTTTGACAGTGAGTGTTTTGGTTCTGGCCGTCACAAGATTAGTGGTTCAAGCAGCAGATTCTCATATTCCCCATCTCTTGATCTCCAGACATGTGGGACATGCTTGAAGGTCTTGGCTGAACTCTCAGTGGTTGCTGTTCTTGCATGTGGTCATGTTTATCATGCTGAGTGCTTAGAGACCATGACTACAGAAGCTGATAAATATGACCCTAATTGCCCCATTTGCACAGTGGGGCAGAAGCATACCACAAAGATCTCTAGGAAAGCTTTAAGAGCAGAGGCAGAATTGAAAATGAAATTCCAGAAGATATCAAGAAATCGTGTGATAGACAGCTATCTTGATGGTGAAGCTGATGACTTGGAACGCAAAAAGATTACAGGGAAAGGGAAGTTCCTGAAAATGGAATCGAGTTCTAGTTCAAAGATCTCATTTGCAAAACCTTTTTTGAAACGACATTTTCCACTTGGAATAAAACGAATTAAGTCAAGCTCCGAGAACGAGTCCAGTAAGAAAAAGGGTTTTTGGGCAAGATATCGCAAAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52028.p1 GENE.R_Transcript_52028~~R_Transcript_52028.p1 ORF type:complete len:422 (+),score=81.89,zf-RING_2|PF13639.2|6.3e-07,zf-RING_5|PF14634.2|1.5e+04,zf-RING_5|PF14634.2|4.3e-06 R_Transcript_52028:264-1529(+)
MGSACCVAARDAPVPNRNRHAELQRSGRYSPSWSFRWDNYRRVAGEIENPSCQTCEGMSTDVRIEIKDGMGSDRGNISDRGSPLENLGTPISQKSPSYEGISTNYLSPSETSMTSNHFVKMNTVEPPEIAAVPATLPFSMPPSSSFSIPGEHFCPQRNLHPSSATPSRRARRSPGHQLFRQISDSKILGLKSPNSNSLSEGRPSFVLSTYSNDLAGGSSDGWSLRTFSELVASSQRERWSFDSECFGSGRHKISGSSSRFSYSPSLDLQTCGTCLKVLAELSVVAVLACGHVYHAECLETMTTEADKYDPNCPICTVGQKHTTKISRKALRAEAELKMKFQKISRNRVIDSYLDGEADDLERKKITGKGKFLKMESSSSSKISFAKPFLKRHFPLGIKRIKSSSENESSKKKGFWARYRKD*

Click here to download the sequence:
Link to NCBI Protein BLAST