Transcript Information: R_Transcript_52038.p1


Annotated TAIR IDAT4G32010.1
Annotated Gene NameHSI2-like 1
Annotated Gene Symbol(s)HSL1, HSI2-L1, VAL2
Annotation TypeOrtholog
Chromosome Positionchr4:15481231-15484897 | Forward length=780
E-Value5.1E-249
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.488186750722
Replicate 25.1009416962295
Replicate 36.0709881236429
Condition 2: 8 Hour
Replicate 18.8028937785802
Replicate 210.947229269488
Replicate 313.585868071701
Condition 3: 24 Hour
Replicate 19.6338283090488
Replicate 26.1159368211908
Replicate 39.6144764146126


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52038.p1 GENE.R_Transcript_52038~~R_Transcript_52038.p1 ORF type:complete len:815 (+),score=156.67,B3|PF02362.17|3.3e-16,zf-CW|PF07496.11|2e-08 R_Transcript_52038:453-2897(+)
ATGGGTTTAAGGACTTGTATGAATATATTGTGTGGTACGACGTCGTCAAGTGAATGGAAGTCTGGTTGGAGCTTACGATCTGGTGAATTAGCCAATCTTTGCTATAAATGCGGGTCTGCTTTTGAGCAACGCATTTACTGTGAGGAATTCCATGCAGATGATTCTGGTTGGAGAGAGTGTGTAACTTGTGGCAAGCGGCTCCACTGTGGGTGCATCGCTTCATGGTCTCTGATTGAGTTGCTTGATGGTGGTGGTGTAAAGTGCATTGGCTGTGCAAGAAATTCAGGCCCCAAGTCTAGTTTGAATGATGGAAAACTTGATGGATCTGGGCCTTCCACTTTGACAGAGAATCATGCTGGCATTAAACTATCAGGCCATTATGAGGGTAGTAATGGCATCCATCAGCCATCTATTTTGCAACATGCTGACACAAATGCAGCCCTTGGACCACTGAAACAAGAGGAATTTTTGCTCCCTCTTGGAGAAGTTAAAAGTACATCTGTCTCAAATGCTCAGCCTTCAATGGACATATTTCAGCAGGCTAAACTTCACATGTCCACCATAAACATGCAAGTAAAGGATCATTTTAAAACAGTAGCTCACCCAAACTTGAATATTACTCTAGGTGTTCCCACAGGAAATCTCCATTCTGCTTCAGCGGCAATTACTGATGAAAGAGATCAAAGAAAGATATCTAATGCTGTCCACCAAGGATTTGTACCTCACCATCTGTTGCCAAGACCGCCCAAATTGGTCCTATCTCCAGCGTCTGACACAAATATGAATGTGATACCATCTATGCGTGTAGCAAGGCCTCCTGTTGAAGGGCGAGGGCGTCACCAACTGCTTCCTCGTTATTGGCCAAGAATTACAGACCAAGAGTTGCAGCAAATATCTGGAGATCCAAATTGTACGATAGTACCGCTGTTTGAAAAGGTTCTGAGTGCTAGTGATGCTGGTCGAATAGGTCGTCTGGTTCTCCCTAAAGCATGTGCTGAAGCATATTTCCCTCTTATATCTCAACCTGAGGGACTTCCTATTAAAATTCAAGACGTGAAAGGAAAAGAGTGGGTGTTTCAGTTCAGGTTTTGGCCTAATAATAACAGCAGAATGTATGTGTTAGAAGGTGTGACACCTTGTATACAGTCAATGCAACTGCAAGCTGGCGATACTGTGACATTCAGCCGTTTGGATCCAGAGGGGAAACTTGTTATGGGATTTCGAAAAGCATCAAACTCCATTCCTGTGCAGTCAATGAAAGGGAGTACTGATTCGCAAATGAATGCTTTGTCAAGACAACTCGACGCAACTGGTGGGAACATTAGGTGGCCTAATGGTGAGAAGTATGGTGAACGAACAGAGGAAGGCACATTACCCACTTCAACGCCAATGCTGGACAGGAAAAAAAGTCGAAATTTAGGTTCCAAGAGTAAGAGATTGCTGATTGATAATCAAGATGTTTTGGCTCTGAGATTAACATGGGAGGAGGTGCAGGGTATGCTTCGACCACCACAAAGTGCAAAGCCTAGTGTTGTCGTGGTTGAAGATTATGAATTTGAGGAATATGAAGAACCTCCAGTTTTTGGGAAGAGCAGCATTTTCACGGCTCGTTCATCTGGGGTCATAGAACAATGGGCTCAATGTGACAGTTGTTCTAAATGGCGGAGATTGCCTGCTGATATATTGCTTCCTCCAAAGTGGACGTGCACAGAAAACGTTTGGGATCAGAGCAGGTGCTTCTGTGCTGCTCCAAATGAATTAAGCCCAAAGGAACTGGAAAATTTTGTACAACTAAGCAAGGAATCCAAGAAGAGAAGAATGGCTATGGCGAGCAGAATGACACAGGAGAAAGAATCTTCAGGCCTCGATGCTCTAGCTAATGCTGCGACTTTGGGAGACAACCCAAGTGATCCGAGCTCTTCATCTGTTGCAGCCACGACAAAACATCCCAGGCACCGCCCTGGTTGTTCATGCATTGTCTGTATTCAACCGCCCAGTGGGAAGGGTAAGCACAAATCGACGTGCACATGCACTGTGTGCATGACGGTGAAACGCCGTTTTAAAACCCTCATGATGAGGAAAAAGAAACGCCAGTCTGAACAAGAAGCTGAGATTGCCCTAAGGAATAGCCAAAAGCAAAAAGAAGATGGCAAGTCTGCAGAACCCGAGAATGTCATAGGATCACGCCTTGAACAGCAGCAACAGGAGAGTCGCGATGAGTTACAGGTTAGCCTGACTCAAACTAACGATAACCAAAGTCAAAATCCTGTAGCCCAAAATAGCAAGGGCCTAGATCTAAATTGCCACCCTGAACGTGAAGAAGACCCAAGGGGAGGAAACTATTATCAAGCGAGCCTAAGGGATCTTCTTCAATTAGCAAGCGAGCCTTTGGAGACATATGGAGCAGAACGGACTCACAACCTTGACATCCGAGCAACAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52038.p1 GENE.R_Transcript_52038~~R_Transcript_52038.p1 ORF type:complete len:815 (+),score=156.67,B3|PF02362.17|3.3e-16,zf-CW|PF07496.11|2e-08 R_Transcript_52038:453-2897(+)
MGLRTCMNILCGTTSSSEWKSGWSLRSGELANLCYKCGSAFEQRIYCEEFHADDSGWRECVTCGKRLHCGCIASWSLIELLDGGGVKCIGCARNSGPKSSLNDGKLDGSGPSTLTENHAGIKLSGHYEGSNGIHQPSILQHADTNAALGPLKQEEFLLPLGEVKSTSVSNAQPSMDIFQQAKLHMSTINMQVKDHFKTVAHPNLNITLGVPTGNLHSASAAITDERDQRKISNAVHQGFVPHHLLPRPPKLVLSPASDTNMNVIPSMRVARPPVEGRGRHQLLPRYWPRITDQELQQISGDPNCTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPLISQPEGLPIKIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLDPEGKLVMGFRKASNSIPVQSMKGSTDSQMNALSRQLDATGGNIRWPNGEKYGERTEEGTLPTSTPMLDRKKSRNLGSKSKRLLIDNQDVLALRLTWEEVQGMLRPPQSAKPSVVVVEDYEFEEYEEPPVFGKSSIFTARSSGVIEQWAQCDSCSKWRRLPADILLPPKWTCTENVWDQSRCFCAAPNELSPKELENFVQLSKESKKRRMAMASRMTQEKESSGLDALANAATLGDNPSDPSSSSVAATTKHPRHRPGCSCIVCIQPPSGKGKHKSTCTCTVCMTVKRRFKTLMMRKKKRQSEQEAEIALRNSQKQKEDGKSAEPENVIGSRLEQQQQESRDELQVSLTQTNDNQSQNPVAQNSKGLDLNCHPEREEDPRGGNYYQASLRDLLQLASEPLETYGAERTHNLDIRATS*

Click here to download the sequence:
Link to NCBI Protein BLAST