Transcript Information: R_Transcript_52082.p1


Annotated TAIR IDAT3G53120.1
Annotated Gene NameModifier of rudimentary (Mod(r)) protein
Annotated Gene Symbol(s)VPS37-1
Annotation TypeOrtholog
Chromosome Positionchr3:19690729-19692490 | Reverse length=217
E-Value2.1E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 147.200388019471
Replicate 239.680232945339
Replicate 345.813475192305
Condition 2: 8 Hour
Replicate 139.910881191545
Replicate 257.330542870353
Replicate 359.972281785419
Condition 3: 24 Hour
Replicate 143.184950159602
Replicate 235.657621201946
Replicate 345.414576685148


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52082.p1 GENE.R_Transcript_52082~~R_Transcript_52082.p1 ORF type:complete len:227 (+),score=50.23,Mod_r|PF07200.9|1.4e-33 R_Transcript_52082:278-958(+)
ATGTTCAAATTCTGGGGATCTCAGGACCAGGAAGCACAATCTCGTCCGCAAGAGGTCCCTGCACAGTCATGGTACCCCCCATCTTCTTCACGACCATCAACGGCTGGCAGCACTTCTTCTAACAGCTATAATGTACAGAGGCCATCTGAAAGACCACAGTCTCCTTCGCATGTTTCACCTGCTGAAGCTGCTGGAATAATATCATCACTGAGGGACAAAAGTGTTGATGAGCTACGGAAGCTTTTGACTGACAAGGAGGCCTACAATCAATTCTTGCTCTCACTTGATCAAGTCAAGACCCAAAACAATGTTAGAGATGAATTACAGAAGGAAACTCTCCAGCTTACTAGAGCGAATTTGGACAAGGAAGCACATATAACAGAGTTACGGAATCAATGCAGAATCATTCGGACAACTGAGTTAGCTGCAGCCCAGGAGAAATTAAATGACTTGGAGAGACAAAAGCAAGAAATCCTAAAATGCTACTCTCCTGCATCGCATCTGCATAGATTGCAAGATGCAATGAACAAGGCAGACGAGGAATCTGATGTTCTTCACCGCCAGTTCCTTGACAGGGAGATTGAGATTGGGGCTTTTGTCCAGAAATACAAGAAACTACGGTCCTTGTATCATCGCCGAGCGCTTACACATCTTGCAGCCAAGGCATCTGCCACGGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52082.p1 GENE.R_Transcript_52082~~R_Transcript_52082.p1 ORF type:complete len:227 (+),score=50.23,Mod_r|PF07200.9|1.4e-33 R_Transcript_52082:278-958(+)
MFKFWGSQDQEAQSRPQEVPAQSWYPPSSSRPSTAGSTSSNSYNVQRPSERPQSPSHVSPAEAAGIISSLRDKSVDELRKLLTDKEAYNQFLLSLDQVKTQNNVRDELQKETLQLTRANLDKEAHITELRNQCRIIRTTELAAAQEKLNDLERQKQEILKCYSPASHLHRLQDAMNKADEESDVLHRQFLDREIEIGAFVQKYKKLRSLYHRRALTHLAAKASATG*

Click here to download the sequence:
Link to NCBI Protein BLAST