Transcript Information: R_Transcript_52086.p1


Annotated TAIR IDAT3G08020.1
Annotated Gene NamePHD finger family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2557753-2561534 | Reverse length=779
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1343676064037
Replicate 23.5528404934746
Replicate 34.414459419235
Condition 2: 8 Hour
Replicate 16.0423403512591
Replicate 26.7003817502965
Replicate 310.195616776199
Condition 3: 24 Hour
Replicate 16.1508578706422
Replicate 25.7017120516181
Replicate 37.2273149436171


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52086.p1 GENE.R_Transcript_52086~~R_Transcript_52086.p1 ORF type:complete len:851 (+),score=173.45,PHD|PF00628.25|0.00022,PHD|PF00628.25|0.00039,PHD|PF00628.25|1.6e+04,PHD|PF00628.25|1e-06 R_Transcript_52086:189-2741(+)
ATGGCATTTCATGTCGCTTGCCCAATTACCTGCAAGCGAATCTGCTACTGTTCGTTAGGGTTTGGGCCCGCACTCCAGACCTCAAGAGGAAAGTCCGATTTTCTCAATGGAATCGATTTAATCGACAAATTTTTGAGCGATCCATGGTTAATTAGGGTTAAGGAAGGTACTACGGTTCAAGTCGCTGTCCCTAAACTCGCCCCGCCGCCTCCTCCGCCTCCTCCTGTCTCTGCCGCCGATGAGGAAGCCGCTGCCGCTGTCGCCGCTGCTGAGGAGCTCTTGTCGGCTCAGACTAAGCGCGCCGCCTTGCAGAAGAAGGCTGCTGTTGCTTCTATGGCTGCTGAGGACTTTGCCAGGCGCTTTGAGTCCGGCGCTCTGGTGGATGTCCCCAAAGATTCTACAGGAGAGGACCAGTGTCAGAGCAATGTAAATGTGATGTGTCGATTATGCTTCTCTGGTGAGAATGAAGGAAGTGAAAGGGCAAGAAGGATGCTTCCATGCAGAAGTTGTGGAAAGAAATATCACAGGAGTTGCTTGAAAACATGGTCTCAACACAGAGATTTGTTTCATTGGAGTTCATGGACATGCCCCTCCTGTCGTGTATGCGAGGTTTGTCGTAGGGCTGGAGAACCAAATAAGTTTAAATTCTGCAAGAGATGTGATGGAGCAATTCATTGCTACTGTATGCAACCTCCACACAAGAATGTTAGTTCTGGACCTTTTTTGTGCTCCAAGCATACAAAATGCCACAGCTGTGGGTCAAATGTTCCAGGCAATGGGATGAGTTTAAGGTGGTTTTTAGGGTATACATGTTGTGATGCTTGTGGGAGGTTGTTCACTAAAGGCAACTACTGTCCTGTTTGCTTGAAGGTCTATAGAGATTCAGAGTCAACACCTATGGTTTGCTGTGATATTTGCCAACGCTGGGTGCACTGCCAGTGTGACGGGATCAGTGACGAAAGATATTTGCAGTTTCAAATTGATGGAAATCTTCCATACACATGCCCGACATGCCGAGGCGAGTGCTACCAGGTTAGGGATCTTGAAGATGCTGTACAAGAGCTGTGGAGGAGAAGAGATGAAGCTGATCGAGACTTGATAGCAAGTTTGAGGGCAGCTGCTGGTTTGCCAACTGACGATGAATATTTTTCAATTTCTCCGTTCTCTGATGATGAAGACAATGGTCCAAGTGCAATTAGGAGTGAGCTTGGGCGTGCAAAATACTCGTTCAAAAGTTTGGCAGACTTTTCCCCAAAAAAGACTAAGGAATCAAATAAAAAATCTTCGAGCAAAAAACAAGTGAAGAAAAAGGGTTTCCAGTTGCCTGTGAATGATGCAATCGAGGTTAATTCTGATGAGCAGCATGATGTAGATGACTTGCTCTCGCAAGCACCAGATTCCTTTTCTACTCCTGTCACTGGAAGCTTGAGCCCGGCTGTCAGAATATGCTCCATGAATGAACAAGGGGGTTTGAAGGACAAACTTGTTGATGAGGCCACAGGGAACAGTGAGGACAGAAAACCAACAATTTTACAGCTTAAAAGCAAGAAGGTCAATGACAATGGCACAAGCGAGGATGTGGGCAAAGGTGCTAGCAAACCAAAGATTATGAAGGGAACCAAGTTAGTCATACACTTGGGTGGACGGAATAAAACCATGACCAATTCTCCAAGGTCCGATTCTTCAAGCTATCAGAGGGAACAAGAGTTGTTGACACAAAGTGGTAGTGAAGCAGTGAGTCAACAAAGAATGGTTGATTACATAGCAGACAAATCTGATGGCACAGCCACCTCTGATGATGGTAACAAAGTAGACAGCCCCCAGGAAATAAAAGGGCTGAATCCAAGGGAGCGTAACATAATAAAGCTTGGTAAGAATAAACCACAAGCGTCTGGCATAAAATTTAAAACTGACAGCAGGAATGGCTTGTTTAGTCCTGAGAGCACTCGAAATATTTCACTAAAGAGAAGCTACGAAGCTAGTGCAGGTACAGTAGGGCTTCAAAACAATGTATCGAAGAGTGAGAAGGTGTCTTTGAGAAAGCATCCAGAGAACAGGTTCGACATATCTATTGATGGTAATAAAAGTAAAAAGCAAGAGCCTCTGCAATCAGATCCTTTGACAAAGGATTCCAGGCCCTTGCTAAGACTCAAATTCAAGACCCCTTATCCAGGATCCTGGCCTGTGCAAGGTGAGGAAGAAAGGGGATCCATCAAAGGTCAACGGTCCAAGAGAAAGAGACCTTCCCCCTTGGTAGAAAAGCCTACACAACAGGAAAGGGAAGATGTGAAGGAGTCGCAAGATGACAGTTTAATGAATGAGATTATGGATGCCAATTGGGTTTTGAAAAAGTTGGGCAGAGATGCTATAGGGAAGAGAGTAGAAGTTCATCAGTCGTCTGATAATTCTTGGCATAAAGGAGTTGTTGGTGATGTCATTGAGGGGACATCGCGATTGTCTATTGATCTCGATGACGGAAGAACCAAGATGTTGGAACTTGGAAAGCAAGGCATTCGATTTGTTCCACAGAAGGATAAGAGACTAAAATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52086.p1 GENE.R_Transcript_52086~~R_Transcript_52086.p1 ORF type:complete len:851 (+),score=173.45,PHD|PF00628.25|0.00022,PHD|PF00628.25|0.00039,PHD|PF00628.25|1.6e+04,PHD|PF00628.25|1e-06 R_Transcript_52086:189-2741(+)
MAFHVACPITCKRICYCSLGFGPALQTSRGKSDFLNGIDLIDKFLSDPWLIRVKEGTTVQVAVPKLAPPPPPPPPVSAADEEAAAAVAAAEELLSAQTKRAALQKKAAVASMAAEDFARRFESGALVDVPKDSTGEDQCQSNVNVMCRLCFSGENEGSERARRMLPCRSCGKKYHRSCLKTWSQHRDLFHWSSWTCPSCRVCEVCRRAGEPNKFKFCKRCDGAIHCYCMQPPHKNVSSGPFLCSKHTKCHSCGSNVPGNGMSLRWFLGYTCCDACGRLFTKGNYCPVCLKVYRDSESTPMVCCDICQRWVHCQCDGISDERYLQFQIDGNLPYTCPTCRGECYQVRDLEDAVQELWRRRDEADRDLIASLRAAAGLPTDDEYFSISPFSDDEDNGPSAIRSELGRAKYSFKSLADFSPKKTKESNKKSSSKKQVKKKGFQLPVNDAIEVNSDEQHDVDDLLSQAPDSFSTPVTGSLSPAVRICSMNEQGGLKDKLVDEATGNSEDRKPTILQLKSKKVNDNGTSEDVGKGASKPKIMKGTKLVIHLGGRNKTMTNSPRSDSSSYQREQELLTQSGSEAVSQQRMVDYIADKSDGTATSDDGNKVDSPQEIKGLNPRERNIIKLGKNKPQASGIKFKTDSRNGLFSPESTRNISLKRSYEASAGTVGLQNNVSKSEKVSLRKHPENRFDISIDGNKSKKQEPLQSDPLTKDSRPLLRLKFKTPYPGSWPVQGEEERGSIKGQRSKRKRPSPLVEKPTQQEREDVKESQDDSLMNEIMDANWVLKKLGRDAIGKRVEVHQSSDNSWHKGVVGDVIEGTSRLSIDLDDGRTKMLELGKQGIRFVPQKDKRLKS*

Click here to download the sequence:
Link to NCBI Protein BLAST