Transcript Information: R_Transcript_52120.p1


Annotated TAIR IDAT3G16810.1
Annotated Gene Namepumilio 24
Annotated Gene Symbol(s)APUM24, PUM24
Annotation TypeHomolog
Chromosome Positionchr3:5723436-5727539 | Reverse length=641
E-Value1E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6714946471098
Replicate 26.1572728493543
Replicate 36.5159928059437
Condition 2: 8 Hour
Replicate 14.7391996672087
Replicate 27.0164643900494
Replicate 33.9922897258916
Condition 3: 24 Hour
Replicate 19.1561929119289
Replicate 28.9255886419345
Replicate 39.6922094068079


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52120.p1 GENE.R_Transcript_52120~~R_Transcript_52120.p1 ORF type:3prime_partial len:341 (+),score=68.65,CPL|PF08144.7|7.5e+03,CPL|PF08144.7|97,CPL|PF08144.7|0.18,CPL|PF08144.7|0.00022 R_Transcript_52120:1497-2516(+)
ATGTATCACATGACACTTTTCGACAATGATTGTATTTGTACTTTCTTGTCACTCAGGTTGGTGGACATAATCCCTAAGCTGGGCCTAAAAAAATCATCTGTATTGCGCCATATGACCTCTGTTCTTCAACCGATCTTGGAGAAAGGAATAGTTGATCACTCCATCATACACAGAGCCTTAGTTGAGTACTTAAGTATTGCTGATAAGTTATCAGCAGAAGATGTTATAAAACAATTGTCTGGATCACTCCTTGTTCGGATGCTTCATACCAAGGACGGCTCGAGAATCGGGACGCTATGTGTCAAGCATGGTAGTGCTAAGGAAAGGAAGAAACTTCTAAAAGGAATGAAAGGACACGTCGGCAAAATTGCCCATGATCACTGTGGAAGCTTGGTGCTGGTCTCTGTTTTATCAACTGTCGATGACACTAAACTAGTTACAAAGGTCGTCATTCGTGAGCTTCAGTCAATCCTAAAGGAACTTGTTTTGGACAAGAGTGGAAGACGTCCCTTGTTACAACTACTGCATCCATATTGTCATCATTATCTTAGTCCTGATGAGTTGGAAGCTTTAAATTATTCAGTTCCTTCTCTCTGCTCAAAGGTTGAAGCAGAAGTGCATCCTAATGATGATAATAAGCCTGAGGAATCTCCAGATAAGGGTGCAGATGATAGTGAGGAAGCTAAAGATGATGACATATTATATTTCAATGAGGGCATCAAAAGCACAGAACCTGGGGAAGATAATGACTCGGTTGAGGGAGGTAAAAAGGCTCCATTAGTCCGGAGGCAGGAATTGTTGGTAAAAAGTGGGCTTGCTGAGAGTCTCGTTGCCACTTGCATTGAGAATGCAGAAGAATTGCTCAAGTCAAATTTTGGAAAAGATGTCTTGTATGAGGTTGTTAAAGGGGGGTTTGATGGTATTCTTCACCCAACTATGGATGAGAAGTTGACAACCTTGTATGAAAAAGTGGCTACTCTTGCTGCCGAGCCTAAATCCGATGATTCAGAACACATTCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52120.p1 GENE.R_Transcript_52120~~R_Transcript_52120.p1 ORF type:3prime_partial len:341 (+),score=68.65,CPL|PF08144.7|7.5e+03,CPL|PF08144.7|97,CPL|PF08144.7|0.18,CPL|PF08144.7|0.00022 R_Transcript_52120:1497-2516(+)
MYHMTLFDNDCICTFLSLRLVDIIPKLGLKKSSVLRHMTSVLQPILEKGIVDHSIIHRALVEYLSIADKLSAEDVIKQLSGSLLVRMLHTKDGSRIGTLCVKHGSAKERKKLLKGMKGHVGKIAHDHCGSLVLVSVLSTVDDTKLVTKVVIRELQSILKELVLDKSGRRPLLQLLHPYCHHYLSPDELEALNYSVPSLCSKVEAEVHPNDDNKPEESPDKGADDSEEAKDDDILYFNEGIKSTEPGEDNDSVEGGKKAPLVRRQELLVKSGLAESLVATCIENAEELLKSNFGKDVLYEVVKGGFDGILHPTMDEKLTTLYEKVATLAAEPKSDDSEHIL

Click here to download the sequence:
Link to NCBI Protein BLAST