Transcript Information: R_Transcript_52146.p1


Annotated TAIR IDAT5G52990.1
Annotated Gene NameSNARE-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21484188-21485006 | Forward length=272
E-Value4.2E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8854585807836
Replicate 23.5118367244342
Replicate 37.2551588827671
Condition 2: 8 Hour
Replicate 12.8755642108864
Replicate 23.1034675864991
Replicate 33.6819993073383
Condition 3: 24 Hour
Replicate 14.6569217508154
Replicate 24.2383771533494
Replicate 35.0629921873606


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52146.p1 GENE.R_Transcript_52146~~R_Transcript_52146.p1 ORF type:complete len:281 (+),score=56.98 R_Transcript_52146:705-1547(+)
ATGAATTCGGATCGGGATCTTGTTCGTTATGCTTGTGTAGCTTACAACCCTAATCAAAATGGGTCAGACTCAACAACGATTCTGGCTGAGTTTAACTCAGCTGACTCGTCCCTTCAAGAACTTGCCCATCAATGTGTGAAAAAAGCACCACCTCATCATTCCATTTTCTCTCATTCATACAGGAACCAAACTTACACCTTCATGATTGATGACCCTTTTGTGTACTTTGGTATGTTTGACCCAAACATGCCTAAACATGATCAAGTTAGGTTTTTGGGTCGTTTACAGGAAGCCCTTCATCATCTTATTAAGGGTAGCTCATACAATAAGTACACCTCTTATTGCTTTCAAGGTGAACTTCATCCTATATTCCACAAATTGATGTCAAAGAGTTTTGATTTTGATGCCCTCAATTTGTTCCCTAATGGGGTTCACAATAGCAACGTGAGTACACCCTCAACGCCTCCGGTTTCGGGTTCAAGCAAGGGGGGTAGGAAGGTTTTGTCTGTGCCATTGTTGTCTTCGTCGAAAGTAGCTGCGAAAGGGTATAAGAAGAAGAGGTTTGGTGGTGGTGGGGATAGTATGACTGAAAGCAAAGAAGCTTTGGTGGAAAATAAGGTTGATATGCTTGAAGATGATGGTGTTAGTGAGGTTAAGACCAGAGAAATTAACTGTCATAATGGTGTTTGTTTGATTGACGGCGGCGCTGGGGGTAGGCAAAAAGCTAGGAAGATTTGGAGAAGACATGTTTGGATTGTGTTGGTTTTGGATTTGGCCGTTTGTTTGATCTTGTTTGGGATTTGGTTGTTTGTTTGCAAGGGATTCCAATGTATTGAAGGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52146.p1 GENE.R_Transcript_52146~~R_Transcript_52146.p1 ORF type:complete len:281 (+),score=56.98 R_Transcript_52146:705-1547(+)
MNSDRDLVRYACVAYNPNQNGSDSTTILAEFNSADSSLQELAHQCVKKAPPHHSIFSHSYRNQTYTFMIDDPFVYFGMFDPNMPKHDQVRFLGRLQEALHHLIKGSSYNKYTSYCFQGELHPIFHKLMSKSFDFDALNLFPNGVHNSNVSTPSTPPVSGSSKGGRKVLSVPLLSSSKVAAKGYKKKRFGGGGDSMTESKEALVENKVDMLEDDGVSEVKTREINCHNGVCLIDGGAGGRQKARKIWRRHVWIVLVLDLAVCLILFGIWLFVCKGFQCIEG*

Click here to download the sequence:
Link to NCBI Protein BLAST