Transcript Information: R_Transcript_52149.p1


Annotated TAIR IDAT4G18975.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10392170-10393665 | Reverse length=287
E-Value3.6E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7833409978872
Replicate 22.5959062332878
Replicate 32.5822140562935
Condition 2: 8 Hour
Replicate 13.650619864862
Replicate 24.3095517730285
Replicate 35.0824509737084
Condition 3: 24 Hour
Replicate 14.1741467686735
Replicate 22.2456263597679
Replicate 35.8897823521105


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_52149.p1 GENE.R_Transcript_52149~~R_Transcript_52149.p1 ORF type:complete len:275 (+),score=51.28 R_Transcript_52149:193-1017(+)
ATGGCGCTTAATTCTTTCTGCTACGACCCTCAGATTTTTCAATATCAGATTCAAATTCCTCGAAGCAGGAAGTTTCTTCTGCATAAGCCCTCGCAAATGTGTGTCACTGCTATCCAGAGCTCGTCCGATCATACCCTACCGCGTCCTTCTGCTTCTAGTGCAGTTGAAAGGACATCCAAAAATATAGTCAAGAAGTCAGGGAAGAGAGAACATCATCTATGGAAATGCAGAGATTCTGCTGGTTCTGGTCAAAAGGCCATGAATTTAGTTCAAATTGTTTCTGGACTTCCGAATGAGAAAGAGGCAGTTTATAGGGCATTAGATGAATGGACTGCCTGGGAGCTGGAGTTCCCATTAATTGCAGCAGCTAAGGCTCTAAGAATCTTAAGAAACAGAAAGCAATGGTTGCGGGTGATTCAAGTTGCTAAGTGGATGTTGAGCAAGGGCCAAGGGACAACCATGGCAACATATGACACACTTCTATTGGCATTTGACCATGAGGCAAGGATTGATGAAGCTGGGTCTCTTTGGAACATGATCTTGCATACTCATACACGTTCTATTTCAAGGCAATTATTCTCTCGGATGATTTCATTGTGTGATCATCATGATATGAAGGAGAAAATAGTAGAGGTTTTTGCAGACATGGAAGAATTAGGTGTGAAACCAGATGAAGATACAGTCAGGAGGGTGGCACATGCGTTTGAGAGACTTGATCAAAAAGACAAAAAAATTTTGGTCCTAAAAAGATATGGTTGTAAATGGAAGTATATCCATTTTAAAGGTGAAAGGGTCAAAGTGAGAAGAAATCCATTTGACGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_52149.p1 GENE.R_Transcript_52149~~R_Transcript_52149.p1 ORF type:complete len:275 (+),score=51.28 R_Transcript_52149:193-1017(+)
MALNSFCYDPQIFQYQIQIPRSRKFLLHKPSQMCVTAIQSSSDHTLPRPSASSAVERTSKNIVKKSGKREHHLWKCRDSAGSGQKAMNLVQIVSGLPNEKEAVYRALDEWTAWELEFPLIAAAKALRILRNRKQWLRVIQVAKWMLSKGQGTTMATYDTLLLAFDHEARIDEAGSLWNMILHTHTRSISRQLFSRMISLCDHHDMKEKIVEVFADMEELGVKPDEDTVRRVAHAFERLDQKDKKILVLKRYGCKWKYIHFKGERVKVRRNPFDD*

Click here to download the sequence:
Link to NCBI Protein BLAST